| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2200 |
|---|
| Symbol | |
|---|
| ID | 8253306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 2530758 |
|---|
| End bp | 2531777 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644935849 |
|---|
| Product | peptidase U61 LD-carboxypeptidase A |
|---|
| Protein accession | YP_003092466 |
|---|
| Protein GI | 255532094 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.498556 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGTA AACATTTCCT CTCTTTCCTG GCCACAGCCG GCGTAACCAT GACCACCTTT
AAAGCATGGG CCAAGCCAGC TGAACTGGCA AAAGAAATAA AAATACCACC TTATCTGCAG
CCCGGTGATA CCATTGGCAT CACTTCCCCG GCAGGTTATA TCACCACCGA ACAGGTACAG
CCAGCCGTAC AGCTGATGGA AAGCTGGGGT TTTAAAGTCC AGATCGGAAA TACCATAGGC
AAACGCGATT TCAGCCTCGG CGGAACGGAT GACGAACGTA CGGCCGATTT ACAGCAAATG
CTGGATGATC CTAATGTAAA GGCCATTATG TGTGCCAGGG GCGGATATGG GGCAGTGAGG
ATCATTGACC GGATCAACTT TAGCAGGTTT AAGCAACAGC CCAAATGGGT CATCGGTTTT
AGCGACATTA CCGTGTTCCA TTGCCACCTC AACAGGAAGC TCAATATAGC TTCCATACAT
TCAAAAATGT GCAACAGCTT TCCGTCCGAC TGGTCGCTGG CCGAGCCCGT ACAAATTGAG
ACCATTCTTT CGATCAGACA GGTACTCAGC GGACAGGATG TAAAATATAC CGCCCCGCCG
GTTAGCGGCA ACAGGAACGG CAGGGCAGAA GGCAGCCTCA TCGGCGGCAA CCTCAGCATC
ATAGAAACAC TTGCCGGCAG TGCTTCCGAC ATTAACACAG ATGGTAAAAT ACTTTTTGTA
GAAGATACAG GCGAGTACCT GTACAGCATA GACCGGATGT TCTGGAACCT GAAACGCAGT
GGCAAACTCG ACAAGCTAAA GGGCCTTATT GTAGGCGGCT TTAAAATTAA GCCTGAAGAT
CCGGGCGATG AATTTGGCAG AACGGCCTAC GAGATCGTCA GCGAAAAAAT AAAAGAATAT
GATTATCCGG TATGTTTTGA TTTCCCTGTA GGCCATCAAA AGAATAACTT TGCACTGAAG
TGTGGTACAA AACACCTACT GAATGTTGAT GCCAATGGAA GTTCACTCGT ATCCATCTAA
|
|---|
| Protein sequence | MNRKHFLSFL ATAGVTMTTF KAWAKPAELA KEIKIPPYLQ PGDTIGITSP AGYITTEQVQ
PAVQLMESWG FKVQIGNTIG KRDFSLGGTD DERTADLQQM LDDPNVKAIM CARGGYGAVR
IIDRINFSRF KQQPKWVIGF SDITVFHCHL NRKLNIASIH SKMCNSFPSD WSLAEPVQIE
TILSIRQVLS GQDVKYTAPP VSGNRNGRAE GSLIGGNLSI IETLAGSASD INTDGKILFV
EDTGEYLYSI DRMFWNLKRS GKLDKLKGLI VGGFKIKPED PGDEFGRTAY EIVSEKIKEY
DYPVCFDFPV GHQKNNFALK CGTKHLLNVD ANGSSLVSI
|
|---|
| |