| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2177 |
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| Symbol | |
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| ID | 8253283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2501782 |
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| End bp | 2502843 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644935826 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_003092443 |
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| Protein GI | 255532071 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.540349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.767418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAACG AATTATATAT GCAGCGTTGC CTTGAGCTGG CCGCTATGGG GATGGGAAAT
GTAAGCCCTA ACCCTATGGT AGGCTGCGTG ATCGTAAGCG ACGGAAAAAT CATTGGAGAG
GGTTACCATG CCCGCTTTGG CGAGGCACAT GCCGAAGTCA ATGCCATAAA TTCAGTTGTA
CACAATTATG GAAATACGGC AGAAACCTTA CTGGCAGCTG CTACAGCTTA TGTTAGTCTG
GAACCCTGCG CACATTTCGG TAAAACCCCA CCCTGTGCCG ATCTGCTCAT CAAACACCGC
ATTAAAAAAG TAGTGATAGG CAATACCGAT CCATTCGACG GGGTAAACGG CAAGGGCATC
GAAAAGCTTA AAAATGCAGG TATTGAAGTC GTATCCGGTG TGCTTGAAGC CGAATGCAGC
CAGCTTAACC GTCGTTTTTT TACCCGCATC GGGCAGCAGC ACCCCTACAT CATTTTAAAA
TGGGCAACAT CCGCAAATGG TTATTTCGCA CCTGAAAACA CCACACAGCA ATGGATCAGC
GGGCCAGAAG CTAAAAAGCT GGTCCACAAA TGGCGGACAG AGGAAGATGC TGTCCTGGTT
GGACGGCTTA CGGCCATGGC CGATAACCCA AGGCTGACCG TCCGCGAATG GTACGGCAGA
AACCCGGTAA GAATAGTGGT CGACAGGCAC CTGCAGGTTC CTTCAAGCCA CCATATTTAC
AATAAAGAGG CAAAAACAAT CATTTTCAAT GAACAAAAAA CTGATGTACA GGAAAACATC
CATTTCATAC AAATGGAAGA TATGCAACAT TACCTGCCGC AAAAAATAGC CTTTCAGCTG
TACCTGATGG ACATCGCCTC CGTAATTATA GAAGGTGGCG CCCAGGTACT CAACCAGTTT
ATCCAGGCCC GCTTATGGGA TGAAGCAAGG GTCTTCAGGT CGGCAGTATC ATGGCCGGCA
GGTATCCCTT CCCCGGAATT AAATTTGCAG TCCTGTGCCA TCACAGATCA GTTCCCCATC
GGAAAAGATC AGTTAACGAT CTATAAAAAC AATCCTTCAT GA
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| Protein sequence | MTNELYMQRC LELAAMGMGN VSPNPMVGCV IVSDGKIIGE GYHARFGEAH AEVNAINSVV
HNYGNTAETL LAAATAYVSL EPCAHFGKTP PCADLLIKHR IKKVVIGNTD PFDGVNGKGI
EKLKNAGIEV VSGVLEAECS QLNRRFFTRI GQQHPYIILK WATSANGYFA PENTTQQWIS
GPEAKKLVHK WRTEEDAVLV GRLTAMADNP RLTVREWYGR NPVRIVVDRH LQVPSSHHIY
NKEAKTIIFN EQKTDVQENI HFIQMEDMQH YLPQKIAFQL YLMDIASVII EGGAQVLNQF
IQARLWDEAR VFRSAVSWPA GIPSPELNLQ SCAITDQFPI GKDQLTIYKN NPS
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