| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2175 |
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| Symbol | |
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| ID | 8253281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2499953 |
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| End bp | 2500852 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644935824 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_003092441 |
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| Protein GI | 255532069 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAGTA ATCCCTATCT CAGTTCCTTT AAAAACTACC TTAAACTGGA GCGTTCGCTC
TCCGGTAATT CTATTGAGGC CTATCTGGGC GACCTGAATA AACTGTCCCA GTATTTTGAA
TCTGTTGACC AAACACCTCA GGTAAAGGAG ATTACTGGTG ATGACCTGAA GCACTTTGTC
AGTTGGATAA ATGAGCTGGG TATGCTGCCC AGTACGCAGG CGCGTGTGGT GTCCGGCTTA
AAAGCTTTCT TTAGTTTTTT AATGCTCGAA GAAATCATTA CCACCGATCC TTCTGCCCTG
CTCGAAAGCC CAAGGCAGGT CAAACACCTG CCTGATACAC TGTCCATTCA GGAAATCAAC
GGAATGATCG GGGCTATCGA TGCCTCAAAG CCAGAGGGCA TGCGCAACAA GGCCATTTTA
GAAACCCTGT ACGGATGCGG ATTAAGGGTT TCAGAGCTCA GCAACCTCAA AATCTCCGAT
GTATTTGAGG AAAATGAATT TATCCGCATC TTCGGAAAGG GAAATAAAGA GCGCCTGGTA
CCCATCGGTC AGACGGCCTT AAAATACATC AACATATACC TCAGGGAAAG CAGGGTGCAT
GTCCCCATTA AAAAAGGACA TGAAGATTAT ATTTTCCTTA ACCGTAGCGG AACCCGTTTG
TCCCGCATCT CTGTTTTCAG TATCATTAAA GCCCTCGCCC TTAAATCAGG CATAAAAAAG
AGCATCAGTC CCCATACCTT TCGCCACTCC TTTGCCACAC ATTTAATAGA AGGCGGGGCC
GATTTAAGGG CTGTTCAGGA AATGCTTGGC CATTCCAGCA TCACCACTAC AGAAATCTAT
ACCCATCTCG ACAGGGATTA TTTAAGGGGT ATAATTACTG AATTTCATCC AAGAAGTTAA
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| Protein sequence | MISNPYLSSF KNYLKLERSL SGNSIEAYLG DLNKLSQYFE SVDQTPQVKE ITGDDLKHFV
SWINELGMLP STQARVVSGL KAFFSFLMLE EIITTDPSAL LESPRQVKHL PDTLSIQEIN
GMIGAIDASK PEGMRNKAIL ETLYGCGLRV SELSNLKISD VFEENEFIRI FGKGNKERLV
PIGQTALKYI NIYLRESRVH VPIKKGHEDY IFLNRSGTRL SRISVFSIIK ALALKSGIKK
SISPHTFRHS FATHLIEGGA DLRAVQEMLG HSSITTTEIY THLDRDYLRG IITEFHPRS
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