Gene Phep_2173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2173 
Symbol 
ID8253279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2498465 
End bp2499478 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content43% 
IMG OID644935822 
Productglycosyl transferase family 2 
Protein accessionYP_003092439 
Protein GI255532067 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTAC CAAGTGTAGC AGTAGTCATT TTAAACTGGA ACGGAAAAGC CCTGCTTCAG 
CAGTTTTTAC CAGGTATAGT TCAGTCGCAA TACCCAAATC TTCAGTTAAT CCTGGGCGAT
AATGCCTCTA CCGATGGTTC CGTAGCCTTT GTAAAGGCCA GTTACCCTCA GGTAAAAGTA
ATCGTTAACG CCCATAATTA TGGCTTTGCA GAAGGCTATG ATAAACTGCT GGAACAGATT
GAAGCAGATT ATTATGTATT GCTCAATTCT GATGTAGAGG TACCTGCCAA CTGGATCCAG
CCTGTTATTG ATGCTATGGA AGCCGACGCC GGCATTGCTG CTGCCCAGCC TAAAATCAAA
TGGCAAAAGG ATAAAACACA ATTTGAATAT GCCGGCGCGG CTGGCGGCTA CCTGGACCTG
TATGGTTATC CTTTTTGCAG GGGGCGGTTA TTTGATACGG TAGAAAGCGA CACCGGCCAG
TATAACAATC AGCAGGAGGT TTTCTGGGCC AGTGGTGCAG CCTTATTCAT TAAAAGCAAA
TGCTGGACAG CAGCCGGAGG GTTTGATGCT GATTTTTTTG CACACATGGA AGAAATAGAC
CTTTGCTGGC GCTTAAAAAA CCTGGGTTAC AAAGTGATCT ACTGCCCCGA TGCCGAAGTT
TATCACCTGG GCGGTGGTAC CTTAAATTCA AATAGCCCTT ATAAAACCTA TCTGAACTTT
AGAAATAACC TGGTTATCAT GCAAAAAAAC CTGCCCTTAA ACGATGCATA CTTCAGGATT
TTCATCCGGA TGTCTCTCGA TTTTATAGCC TGGCTGCATT TTCTGCTGCA AGGCAAAACA
CAGTTTGCCT GGGCAATAAA TAAAGCACAT TACCATTTTC TGCTCAACCT CTCAAAAAAT
GGTGCCAAAA GGACAAACAG GCAAATCAGC TTTCAACAAC ATACCGGCCT ATACCCCTAT
AGTATTATAT GGGCTTATTT TATCAAAAAA ATAAGGTTTT TTACGCAGTT GTAA
 
Protein sequence
MSVPSVAVVI LNWNGKALLQ QFLPGIVQSQ YPNLQLILGD NASTDGSVAF VKASYPQVKV 
IVNAHNYGFA EGYDKLLEQI EADYYVLLNS DVEVPANWIQ PVIDAMEADA GIAAAQPKIK
WQKDKTQFEY AGAAGGYLDL YGYPFCRGRL FDTVESDTGQ YNNQQEVFWA SGAALFIKSK
CWTAAGGFDA DFFAHMEEID LCWRLKNLGY KVIYCPDAEV YHLGGGTLNS NSPYKTYLNF
RNNLVIMQKN LPLNDAYFRI FIRMSLDFIA WLHFLLQGKT QFAWAINKAH YHFLLNLSKN
GAKRTNRQIS FQQHTGLYPY SIIWAYFIKK IRFFTQL