Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2171 |
Symbol | |
ID | 8253277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2496934 |
End bp | 2497545 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644935820 |
Product | WbqC-like family protein |
Protein accession | YP_003092437 |
Protein GI | 255532065 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.547253 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAGTT CAGCTATATT CCCGCTTTTT TATCTTCCGC CTGTAGGTTA TTTCTCTGGT TTAAAAGCGT TTGATTACTG TTTTTCAATC GAAAGGGAAG AGCATTTCCC TAAACAAACG TACAGGAACC GCGCAAGGAT ATATTCGCCA AATGGCAATC TGGACCTGAT TATCCCGGTT GTGAAAGGTT CAAAGGTACA TACCAAAGTG AAAGATGTTA AAATCAGTAA TGATTTTAAC TGGCAGCGCT TACACTGGAA AAGCTTTGAA AGCTGCTACA GGAATTCGGC CTATTTTGAA TATTATGAAG ATGAGTTTGC GGTTTTTTAT CAGCAAAAGT TCGGATTTCT GTTTGATTTT AACCTTCAGC TGCTGGACTG GCTGTTTAAA CAATTGAAAA TAACGCCTGC ATATGCCTTT ACAAATGAGT ACCATAAGGA AACTGATGTG GTGCAGGATT ACAGGACCAA GCTTCATTTT AAACAGGAGG TTGCTGCCGG TGATTTTAAA CCATATTTCC AGGTTTTTGA CGACCGGCAA GGCTTTAAGC CAAACTTAAG TATCGTTGAT CTGTTGTTTA ACCAGGGTCC GCAATCCAAA AACTATCTCT GA
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Protein sequence | MQSSAIFPLF YLPPVGYFSG LKAFDYCFSI EREEHFPKQT YRNRARIYSP NGNLDLIIPV VKGSKVHTKV KDVKISNDFN WQRLHWKSFE SCYRNSAYFE YYEDEFAVFY QQKFGFLFDF NLQLLDWLFK QLKITPAYAF TNEYHKETDV VQDYRTKLHF KQEVAAGDFK PYFQVFDDRQ GFKPNLSIVD LLFNQGPQSK NYL
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