Gene Phep_2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2171 
Symbol 
ID8253277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2496934 
End bp2497545 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content40% 
IMG OID644935820 
ProductWbqC-like family protein 
Protein accessionYP_003092437 
Protein GI255532065 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.547253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGTT CAGCTATATT CCCGCTTTTT TATCTTCCGC CTGTAGGTTA TTTCTCTGGT 
TTAAAAGCGT TTGATTACTG TTTTTCAATC GAAAGGGAAG AGCATTTCCC TAAACAAACG
TACAGGAACC GCGCAAGGAT ATATTCGCCA AATGGCAATC TGGACCTGAT TATCCCGGTT
GTGAAAGGTT CAAAGGTACA TACCAAAGTG AAAGATGTTA AAATCAGTAA TGATTTTAAC
TGGCAGCGCT TACACTGGAA AAGCTTTGAA AGCTGCTACA GGAATTCGGC CTATTTTGAA
TATTATGAAG ATGAGTTTGC GGTTTTTTAT CAGCAAAAGT TCGGATTTCT GTTTGATTTT
AACCTTCAGC TGCTGGACTG GCTGTTTAAA CAATTGAAAA TAACGCCTGC ATATGCCTTT
ACAAATGAGT ACCATAAGGA AACTGATGTG GTGCAGGATT ACAGGACCAA GCTTCATTTT
AAACAGGAGG TTGCTGCCGG TGATTTTAAA CCATATTTCC AGGTTTTTGA CGACCGGCAA
GGCTTTAAGC CAAACTTAAG TATCGTTGAT CTGTTGTTTA ACCAGGGTCC GCAATCCAAA
AACTATCTCT GA
 
Protein sequence
MQSSAIFPLF YLPPVGYFSG LKAFDYCFSI EREEHFPKQT YRNRARIYSP NGNLDLIIPV 
VKGSKVHTKV KDVKISNDFN WQRLHWKSFE SCYRNSAYFE YYEDEFAVFY QQKFGFLFDF
NLQLLDWLFK QLKITPAYAF TNEYHKETDV VQDYRTKLHF KQEVAAGDFK PYFQVFDDRQ
GFKPNLSIVD LLFNQGPQSK NYL