Gene Phep_2155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2155 
Symbol 
ID8253261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2478696 
End bp2479634 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content43% 
IMG OID644935804 
Productprotein of unknown function DUF81 
Protein accessionYP_003092421 
Protein GI255532049 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.518324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.256339 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTC AGGAAACCGA AATTAAAGTA GCAGTACAAC CCAAATCCCA GGAGAAAAAA 
TGGAGGCAGA TCGCTTATCT ATGCTTATTT ATCCTGGCGG TTTTGTTTAT TGGTTTTGCC
TTGTATACTT ACCTGTCTTA TGAATCTGTT ATTGCTTTTG GTAAGAATGC ATACGGACAA
CTGGATGAAA AGTTCTATTG GATGCTTGCA GTAGGTTTTT TTGCACAACT TGTTGATGGT
GCACTGGGCA TGGGCTATGG CGTTGTTTCT ACCACCCTGT TGTTATCAGG CGGCTTAAAC
CCTGCCGTAA TATCGGGCAG TATACATACT GCAGAAATGT TTTCTAGTGG TGCATCTGGC
TTCAGCCATT ACCGTTTTGG CAATGTAAAC AAGAAATTAT TTAAGACACT ATTAATTCCG
GGTGTGTTGG GCGCAATAGC GGGGGCACTA TTGCTGAGTT ATGCCGGTGA AGCTTTTTCG
CAATGGATCA GACCGGTAAT TTCTATTTAT ACCTTGCTGC TGGGAATCAG AATATTAAGC
AATGCCTTTA AAGCCAAGAC CAAGCCTCAA AAAGTTAAGC GTGCAGGCTG GCTTGCAGGT
GCCGGGGGTT TTTTAGATTC CTTTGGGGGT GGTGGATGGG GCCCATTGGT TACGTCTACC
CTCATTTCAA AAGGACGCAC CCCAAAATAT GTGATTGGTT CCGTAAGTCT GACCGAATTT
TTTGTAACCA TGGCCAGCGC CGTTACTTTC TTTTTCGTTT TAGGCGTTAG TCACTGGCAA
TCCATTGTTG GTTTAATTGT AGGTGGCGTA GTAGCTGCAC CAATAGCGGC CAATCTGGTA
GGAAAACTTC CTATCAAAAA AATGTTTATT GGCGTTGCCA CCATTGTAAT CATCTCCAGT
ATCCGTATTA TCTGGATGTC TGTTGGTAAA TTATTCTAA
 
Protein sequence
MSIQETEIKV AVQPKSQEKK WRQIAYLCLF ILAVLFIGFA LYTYLSYESV IAFGKNAYGQ 
LDEKFYWMLA VGFFAQLVDG ALGMGYGVVS TTLLLSGGLN PAVISGSIHT AEMFSSGASG
FSHYRFGNVN KKLFKTLLIP GVLGAIAGAL LLSYAGEAFS QWIRPVISIY TLLLGIRILS
NAFKAKTKPQ KVKRAGWLAG AGGFLDSFGG GGWGPLVTST LISKGRTPKY VIGSVSLTEF
FVTMASAVTF FFVLGVSHWQ SIVGLIVGGV VAAPIAANLV GKLPIKKMFI GVATIVIISS
IRIIWMSVGK LF