Gene Phep_2142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2142 
Symbol 
ID8253248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2469917 
End bp2470918 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content40% 
IMG OID644935791 
Producthypothetical protein 
Protein accessionYP_003092408 
Protein GI255532036 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.291854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAGA TCTTATTTGT TTTTATAGCG ATCTCATTTC TTGCCATACA GTGTAAGAAG 
AAAGGTTACA CGGCGGAGAA TGGAGGCAAG CCTTCTCCGC CGGTCACTGT TCCGGGGGTC
GACCCACCAG CATCAGTGGC AGATTGTAAA AAATGCATTA TCCTCGCAGA ACAGCTTCAG
ACAAGGGTTG CCATTGCAGA TGTCGCTTCT AAAGCCATAA TATGGGAATG GAGCCCCGGA
ATACCAGATA TTAAAGCAGA TGCTTTAAAG TGGTTTAGCA ATATCAGCGA TGCAAAGCTT
GTTTACAATG GCAAATATAT ACTTGCAACA GCTTCCGGAG GGGGAGTGGC TCTGGTAAGA
ATTGCTGATA AAAAGACAGT TTTTTATGCC TTTGCAGGGG GAAATGTACA TTCTGCAGAA
CTACTCCCGG ATGGAAACAT AGTAAGTGCT TCTAGTACAG GTAATTATTT AACCTTGTTT
AAGGTAGATA CGTTAAGTTT TCCGGACCAT GTTTATGCCA AAACTATACC GATCGATTTT
GGACATAATG TGGTGTGGGA TCATAAAAAC CAGGTGCTTT GGTCGGCCGC TATGAATCAG
TTAAAGTCAT TTAAGTATAA TTTCAACTGT GATTTTCCAG ATCTGGATCT GCTAGAATCC
ATCAGTATAC CAGGTACCGA AGCCCACGAT CTGTTTCCTG TACATGGTGA AAATGCTTTG
TGGCTAACCA ATACCACCAA TGTTTATAAA TTTGATGTTG GAACTAAAAA ATTTACACAG
GCAGAAGTGA TACAGGCTGA TATTAAGAGT GTTTCTTCCG GGCCTGAAGG TTATCCGATA
ATATTATTGA AACCCAAAGT ATCCTGGTGG GCAGATGAAG TGATTGACGC AAAAGGCAAC
ACTATATTTT TACAAAATGG CTTAAAAATT TATAAAGCGA GATGGTTGCT GCAAAATGTT
TTCAGTTATC CTGTAAATGA TGTAATTAAG CAATGCAAGT AG
 
Protein sequence
MRKILFVFIA ISFLAIQCKK KGYTAENGGK PSPPVTVPGV DPPASVADCK KCIILAEQLQ 
TRVAIADVAS KAIIWEWSPG IPDIKADALK WFSNISDAKL VYNGKYILAT ASGGGVALVR
IADKKTVFYA FAGGNVHSAE LLPDGNIVSA SSTGNYLTLF KVDTLSFPDH VYAKTIPIDF
GHNVVWDHKN QVLWSAAMNQ LKSFKYNFNC DFPDLDLLES ISIPGTEAHD LFPVHGENAL
WLTNTTNVYK FDVGTKKFTQ AEVIQADIKS VSSGPEGYPI ILLKPKVSWW ADEVIDAKGN
TIFLQNGLKI YKARWLLQNV FSYPVNDVIK QCK