| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2140 |
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| Symbol | |
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| ID | 8253246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2467299 |
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| End bp | 2468888 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644935789 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003092406 |
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| Protein GI | 255532034 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.305226 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA TATCAATTTT ATTTTTGTTA AGCCTATTGC TGGTATCCTG TTATAAAGAT
GCACTGGAAA CACAGCCAAA CGACAGGTAT ACAGAAGATA CTTACTGGAC TTCTGAAAAA
ACAGCTATGG CCGGTTTAAC CGGATGTTAC CAGGTACTGA CCTCCAATTC ATTATATGGA
TATGCCACTC CCTTATGGGA AGAAACGGCT ACGCCCAATG CCTATAATTA TGATAATTCT
GCTGGTTTTG GCCTGATTGC CCTGGGTACA CATACGGCTA CCAATGCCGG GGCCGGAAAT
ATTGTTTCTG GTGTAATCGA ATTCAGATGG AAAGACTGCT ACCGTGGGAT TGGCAGGTGT
AATACCCTTT TGGACCGGAT CAATGCTGTA CCCATGGCCG ATGTTTTAAA AGACAGGATG
AAAGCGGAAG CTAAGTTTTT AAGGGGACTG TATTATTCCA TACTGGCCAC TTATTATGGT
GGTGTACCGC TTATTTTAAC ACCCCCGAAT TTTGATCAGG ACGCAAAATT ACCACGAAAT
AGCCGGGCAG AAGTTGTTCA GCAGGTTGTA AAGGATATGG ACGAAGCTGC AATGGTACTG
CCACCCAAGT TTACAGGTAA CGATATAGGC CGTGCAACAA GCGGTGCAGC TTTGGCCATT
AAAGCAAGGA TGTTACTATT TGAGGCCAGT CCGCTTAATA ACCCTTCCGG CGATCTAACC
AAATGGGTTG CCGCCGCCAA TGCGGCAAAA GCCATAATAG ACCTTCCGGG AACAGGTTAT
GGCTTGTTTC CAAATTACAG ACAATTGTTT TTACCAGCCA ATGAGAACAA ACAGGAGACC
GTTTTTGATG TACAGTACAC AATTTCCACA ACAGGTTTTG GTAATTCTTT CGACCTCATT
AACCGGCTTT ACAATACCAA CGCACCCTTG CGAGACCTGA TCAATGCTTA TGACATGAAA
GATGGGCTTC CACCAGCCCA ATCGCCATTG TACGATGCTT TAAAGCCATA TGATAATCGT
GACCCGCGCA TGTACCAAAC CATAATTTAT CCGGGAGATA CCTATCTGGG GGCACCCGTT
ACTACCGCCA CTTTTAAACA AACCGGATAT GGGGTAAAAA AATATGGCAT ATATGATAAA
GAAGCGGTTG CAGCTGCCGA TCTGATCAAC AGCGCCGGAC GATCGCAGAT CAATTATATG
GTGGTACGTT ATGCGGATGT ACTGCTGATG TATGCCGAAG CACAAAATGA AGTACTCGGG
GCTCCTGACG TTACTGTACG AAATGCTGTT GAACTTGTAC GTCAGCGGGC AGGACTGGTG
CCTTATCAGG TATCAGCTAC GCTTACAAAA CCACAGATGC GCGAGCTAAT CAGGCATGAA
AGGAGAATAG AATTTGCATG TGAAGGTTTT TATTATACAG ATATCAGAAG ATGGAAAACG
GCTGAACAGG TGTTAACCGG CCCTATATTC AATTCGCAGA ACCAGCAAAT TGTTACCCGA
AATTTTAACC CATTGAGAGA TTACTGGTGG CCAATTGCGC AAACCCAGAG AGAGCTTAAT
CCAAACCTTG AACAGAATGA TAATTATTAA
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| Protein sequence | MKNISILFLL SLLLVSCYKD ALETQPNDRY TEDTYWTSEK TAMAGLTGCY QVLTSNSLYG
YATPLWEETA TPNAYNYDNS AGFGLIALGT HTATNAGAGN IVSGVIEFRW KDCYRGIGRC
NTLLDRINAV PMADVLKDRM KAEAKFLRGL YYSILATYYG GVPLILTPPN FDQDAKLPRN
SRAEVVQQVV KDMDEAAMVL PPKFTGNDIG RATSGAALAI KARMLLFEAS PLNNPSGDLT
KWVAAANAAK AIIDLPGTGY GLFPNYRQLF LPANENKQET VFDVQYTIST TGFGNSFDLI
NRLYNTNAPL RDLINAYDMK DGLPPAQSPL YDALKPYDNR DPRMYQTIIY PGDTYLGAPV
TTATFKQTGY GVKKYGIYDK EAVAAADLIN SAGRSQINYM VVRYADVLLM YAEAQNEVLG
APDVTVRNAV ELVRQRAGLV PYQVSATLTK PQMRELIRHE RRIEFACEGF YYTDIRRWKT
AEQVLTGPIF NSQNQQIVTR NFNPLRDYWW PIAQTQRELN PNLEQNDNY
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