| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2139 |
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| Symbol | |
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| ID | 8253245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2463846 |
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| End bp | 2467241 |
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| Gene Length | 3396 bp |
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| Protein Length | 1131 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644935788 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003092405 |
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| Protein GI | 255532033 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0246116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.23403 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAAAA ATTTTACGAA ATTTTTTTGT ACGCCTCAGG GCTACATCAG GAAATTCCTT
CTGATTATGA AAATTACAAC GATCTTAATG TTTGCTACAT TAATGCAGGT AAGCGCAACC
GGCCTGGCAC AGCGCATTAC CCTTAATCAG AAATTTACTA CCTTAAAAAG GGTTTTTAAT
GAAATAAACA AGCAAACCGG TTATAACATA TTATGGTCTG CAAAAAAAGT AAAGAATACA
CAGGTCGTAA ATGTGAATTT TGAAAATATC TCTTTGCGGG AGGCGCTGAA CAGATGTCTG
GATGGTTTTC CCTTAACCTA TACTATTGAA AACAATGTTA TTGTAATCAG GGAGAAAGAA
AAGACACTTG CCGATAAGAT CGTTGATTAT TTTAAGGTAA TAGACCTGAC CGGCAGGATT
ACTGATTTAA ATGGGGCACC TTTGCCGGGC GCTTCTGTAA TGGTTAAAGG CAGCACCCTC
TCGGCAACGG CCGATGCAAA TGGGGACTAT CAGATCAGGG TGCCGGATAA CGACGCCATA
CTGATTTTTA AGTATGTAGG CTTTTTAAGC CAGGAAGTTA AGGTAGATGG CAGGACAAAA
ATAAATGTTC AGTTAAAAGA GGACCAACAG CTGCTTACCG AAGTTGCGGT TGTGGGTTAT
GGTACGGTTA AAAAAGTGAA CCTGACAGGC TCTTTATCTA TTCTTGACAT GTCTACCCGC
GAAAACCGGC CACTTACCAA TGCCAGTCAG GCATTGCAGG GTGTTTCAGG ATTGTGGGTA
AACCAGGCCG GGGGTAAACC TGGGCAGGAT GGAGGAAGTA TCCGTATCCG AGGGATCGGT
TCAATCGGCT CGTCGGGTAA ATCTGACCCG CTGGTGCTGG TAGACGGGAT AGAATACAAC
ATCAATGAGA TTAACCCCGA TTTCATTGAA ACGATAACTG TTCTTAAAGA TGCTTCGGCC
GCAATATATG GGTCAAGGGC TGCAAACGGT GTAATTCTTG TGACCACTAA AACCGGTAAA
AAAGGTAAAA CAGAGATCAA TTATAATTTC AGTTATGGCA TACAGGAAGC TACGGCTTTG
CCTGATGTAT TGTGGGACCC TATTCAGTAC ATGGAACTGA AAAACCAGGC GCTCATCAAT
GAAGGCAAAT CGGCTGCATC TGTAGATTAT TCTGCAGCGC AGATTGCGGA ATATAAAAAC
GGAATGGCCA GCAACCCTAT TGCTTATCCT AACCTGAACT GGTTTGACCT GGTCTTGAAA
AATGGCTATA TCCAACAGCA TAACTTAAGG TTCTCTGGTG GTAATGACAA TGTATTGTAC
AATATTGGAT TGGGATATAT GGACCAGGAC GGCATTTTAA TTGATGCCAA TCATGCAAAC
AGGTATACAC TCAATGCAAA TGTTTCGGCC AATGTGACAC AGAAGTTAAG GATCGGGACA
AATATAGTGG GCAATTACAG GACTTATACA GAGCCTGCTT TTGGAGGGAC TTCCGGTACT
GCAACCAGCT ATTATTTTAC CAGGTTAACG CGTGTGCTGC CCATTTTTAC GCCTTATACT
ACCGACGGAA GATATGGTTC GGTAGTGTTC CCTACACCCG GAAGAAATAC CATAGAAAAT
CCCTTGATGC TGCTTAAAGA AGGACGGAAT GTACGTACAC CCCAACGGGT ACTGGCAAAA
GTATTTGCCG ATTATGAACT CCCTTTTAAT CTGAAATACA GCATTAACTT TGGTGTCGAC
CGGCTTGATG GCTATGCCAG TGTGTTTACA CCATACCTGG TATCTTATCA TCCGATAACA
GGAGCGCCCA ATAATTACAA TGTAAACCCC AGTTCTTATG AATACAATGA AAATGAAGTG
AACACTTCCT TTTACCATAC CCTGGACTGG AAAAAGGTGT TTGCAGAAAA ACATGCCTTA
AATGCGGTAA TTGGAGGTAG CTTTAATAAT TTTTACAGGA AATCGTTTTC CGGACAGATT
GAGGGGTATT TCGATAATAC CTTGACCGAT CTTTCTGCCG GTTCTGTGAA TCCGGCAACA
AGCGGCACAA GGACAAAAGA TGTACTTGCT TCTTACTTTG GCCGGTTAAA TTATAGTTTT
GCCGATAAAT ACCTGGTTGA AGCCGTAGTG CGCTATGACG GTTCTTCAAG ATTTTCAGAA
GGAAACAAAT GGGGAGCATT CCCTTCTGTA TCGGCCGCAT GGAGAATTGA CCAGGAACAG
TTTTTTAAAA ACATGCCATC CATTAACCAG TTGAAACTAC GCGCTTCATG GGGGAAGCTG
GGTAACCAGG CTGTAGAACT TTACAGCTAT CTTAATTCGG TAAGACTGGG CGCTGATTAT
TCCTTTAATA ATGTGATTAG TCCGGGTTCA TCCGTAAATG CCTATAACGA TCCGGCGATT
TCCTGGGAAA CCACTACGAC AACTAACCTG GGTGTCGACC TTGAAGCCTG GAAAGGATTG
CTGGGCATTA CTTTTGATGT TTTTAAACGG AGAACCACGG GAATTCTGAG GCCTGTGAAT
ATTCCTTATC AGGTAGGCGG ATTAACCGGC CCGCAAAAAA ATGTAGGTGT GGTAGACAAT
GCAGGCTTTG ACCTTAACTT GTCGCACCGA AATACGATCA ATGATTTTAG CTATTCCTTT
ACTGGTGGTG TAAGTTATGT GAAAAATAAG GTAGTCGACC TGAAAGGAGA AACCATCATC
AGTGGCAGGA GGATCATAAA AGAAGGATAC CCTATCGATT CCTATTACAT TTATCAGGCA
GATGGCATTT ACCAGAACCA GCAGGAGGTA GACAATAGTC CTAAAGTGAG TACCGGGGTA
AGACCAGGTT ATCTGAAGTA TAAGGATATC AATGGCGACA ATAAGATTGA TGGTAACGAC
CGTGTAATTA CCGGCAGGTC GAACCCGCAG TTTACCTATA GTTTTAATTT AAACCTGGGT
TATAAGAATT TTAGCCTGAC TTCCTTTTTT CAGGGCATTC AGGGAATTGA CCTGTATCCA
ACCGTTAACC TTGCACAACC TTTTAACAAC GGCGCCGGAG TAACCAGGGA GTGGGCTACT
GATGCGTGGA CACCTGGCAA CCCGGGTGCC AGACTACCCA TCCTTACAAC GGCTACCGGA
GCGCCGGAAA TGTATTCCAC AGCAAATTCG TCCTCATTCT GGTTACAGGA CGGTTCTTAT
CTGCGGCTTA AAAGTCTGCA GTTGAAATAC GATTTTAAAC AGAACTGGGT TTCTAAGCTC
TCTTTGAACA AGGTTGCCTT ATTTGTGAAT GCCGAAAACC TCGTAACCTT TACCAGTTTT
AAAGGGTTTG ATCCGGAAAA AGATATCAAA TCTGATAATT TTTATGAATA TCCGACATTG
AAAACCTTCA GTTTCGGTAT AAATGCAACA TTTTAA
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| Protein sequence | MYKNFTKFFC TPQGYIRKFL LIMKITTILM FATLMQVSAT GLAQRITLNQ KFTTLKRVFN
EINKQTGYNI LWSAKKVKNT QVVNVNFENI SLREALNRCL DGFPLTYTIE NNVIVIREKE
KTLADKIVDY FKVIDLTGRI TDLNGAPLPG ASVMVKGSTL SATADANGDY QIRVPDNDAI
LIFKYVGFLS QEVKVDGRTK INVQLKEDQQ LLTEVAVVGY GTVKKVNLTG SLSILDMSTR
ENRPLTNASQ ALQGVSGLWV NQAGGKPGQD GGSIRIRGIG SIGSSGKSDP LVLVDGIEYN
INEINPDFIE TITVLKDASA AIYGSRAANG VILVTTKTGK KGKTEINYNF SYGIQEATAL
PDVLWDPIQY MELKNQALIN EGKSAASVDY SAAQIAEYKN GMASNPIAYP NLNWFDLVLK
NGYIQQHNLR FSGGNDNVLY NIGLGYMDQD GILIDANHAN RYTLNANVSA NVTQKLRIGT
NIVGNYRTYT EPAFGGTSGT ATSYYFTRLT RVLPIFTPYT TDGRYGSVVF PTPGRNTIEN
PLMLLKEGRN VRTPQRVLAK VFADYELPFN LKYSINFGVD RLDGYASVFT PYLVSYHPIT
GAPNNYNVNP SSYEYNENEV NTSFYHTLDW KKVFAEKHAL NAVIGGSFNN FYRKSFSGQI
EGYFDNTLTD LSAGSVNPAT SGTRTKDVLA SYFGRLNYSF ADKYLVEAVV RYDGSSRFSE
GNKWGAFPSV SAAWRIDQEQ FFKNMPSINQ LKLRASWGKL GNQAVELYSY LNSVRLGADY
SFNNVISPGS SVNAYNDPAI SWETTTTTNL GVDLEAWKGL LGITFDVFKR RTTGILRPVN
IPYQVGGLTG PQKNVGVVDN AGFDLNLSHR NTINDFSYSF TGGVSYVKNK VVDLKGETII
SGRRIIKEGY PIDSYYIYQA DGIYQNQQEV DNSPKVSTGV RPGYLKYKDI NGDNKIDGND
RVITGRSNPQ FTYSFNLNLG YKNFSLTSFF QGIQGIDLYP TVNLAQPFNN GAGVTREWAT
DAWTPGNPGA RLPILTTATG APEMYSTANS SSFWLQDGSY LRLKSLQLKY DFKQNWVSKL
SLNKVALFVN AENLVTFTSF KGFDPEKDIK SDNFYEYPTL KTFSFGINAT F
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