| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2138 |
|---|
| Symbol | |
|---|
| ID | 8253244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 2462530 |
|---|
| End bp | 2463666 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644935787 |
|---|
| Product | FecR protein |
|---|
| Protein accession | YP_003092404 |
|---|
| Protein GI | 255532032 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.131485 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAA AGGATATTAA AAATATACTT CATAAGGTGG ATTCAGGTAT AGCCTCGGCA
GAAGAAGAGG ATATAGCGAA GTATTGGCTC CACTATTTTC AAAAGGAGGA TGTTCCAGCC
CTTTCAGCAG CCGAACTTGA TAAAGAAAGC ATGGCGGTTT TTACCGCGCT TATGAAAAAC
CGTAGCACTA GACCGGCTGG TATAAGACGG TTCTGGTATC CGGCAGTTGC AGCAGCTGTA
TTTGTCATCA TAGCTGCGTT CTGGTTTTAT ACCGACAGGC AGGCAGGTGC TGGTAAACCA
GTTGCTTATG CAAACGATGT GGCACCAGGT AAAAAAACGG CCACTTTAAC CCTGGCCAAT
GGCAAAAAGA TCGTATTGTC TGACGCCCTT AACGGGGAAA TTGCAAAACA GGCCGGTGTT
TCTATTTTTA AGACACCAGA CGGACAGGTT GTTTATAAGA TTGACCCATC CCGACAGCCA
GGGGTAGCAG CAGCCTATAA TATGCTGAGT ACTTCAAGAT CTGAAACTTA TCAGATCATC
CTTCCTGATG GTTCTAAAGT CTGGCTAAAT GCAGCTTCAT CAATTAAATA TCCCGCAACC
TTTGCATCCT TCAAAAAACG TGCAGTTGAA CTCAGTGGCG AAGCTTATTT CGAAATCGCA
AAAGATGAAA AGCATCCTTT TGTGGTGAAA ACAGATCAGC AGCAGGTTGA AGTACTGGGT
ACACATTTTA ATGTCAATGC CTACAATGAT GAGGGGGTTA CAAAAACGGT TTTACTGGAA
GGTGCTGTAA GGATAAATAC CGGAAATGTA GCAGGTGGCG TTTTAAAACC CGGACAGCAG
GGGGTATTGG CAGCTGGTAA GCTAAAAATA GAACCTGCGG ATATAGAGAC AGAACTGGCC
TGGAAAAATG GTTTCTTCCG CTTTAATGAT GAGCAACTGG AAAGTATCAT GAAAAAAATA
TCAAGGTGGT ATGACATCCA GGTAGTCTAC GAAAATGAAG AACTGAAAAA AGAGCCGTTT
GCAGGCGTAA CCACACGTTT TGCAAATGTA TCGGAACTGT TGAGGATGCT GGAGCTGACC
GGTGAGGTCA AATTTAAAAT TAATGGCAGG CAGATCAGGG TATTGAACGC AAAATAA
|
|---|
| Protein sequence | MDKKDIKNIL HKVDSGIASA EEEDIAKYWL HYFQKEDVPA LSAAELDKES MAVFTALMKN
RSTRPAGIRR FWYPAVAAAV FVIIAAFWFY TDRQAGAGKP VAYANDVAPG KKTATLTLAN
GKKIVLSDAL NGEIAKQAGV SIFKTPDGQV VYKIDPSRQP GVAAAYNMLS TSRSETYQII
LPDGSKVWLN AASSIKYPAT FASFKKRAVE LSGEAYFEIA KDEKHPFVVK TDQQQVEVLG
THFNVNAYND EGVTKTVLLE GAVRINTGNV AGGVLKPGQQ GVLAAGKLKI EPADIETELA
WKNGFFRFND EQLESIMKKI SRWYDIQVVY ENEELKKEPF AGVTTRFANV SELLRMLELT
GEVKFKINGR QIRVLNAK
|
|---|
| |