| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2132 |
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| Symbol | |
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| ID | 8253238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2456738 |
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| End bp | 2458204 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644935781 |
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| Product | glutamate synthase, NADH/NADPH, small subunit |
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| Protein accession | YP_003092398 |
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| Protein GI | 255532026 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.550582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.12901 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAAG TAACTGGATT TTTAGAGTAT GAAAGAACTG CTCCTGTAAA AGAAGATGCT
AAAACTCGTT TAAAACATTA CAATGAGTTT GTTGAAACTT TTGAAGCTGA GCAAATTAAC
AAACAGGCAG CAAGATGTAT GGATTGCGGG GTGCCGTTTT GCCAGTCGGG CTGTCCGCTG
GGTAACGTAA TCCCTGAATT TAATGAGGCT GTATATAAAG GGGATTGGCA GCTGGCTACA
ACTATTTTGC TGAGCACCAA TAACTTTCCT GAATTTACAG GTAGGATTTG TCCGGCGCCA
TGCGAATCGG CCTGTGTACT GGGGATCAAT AAATCGCCTG TATCTATTGA AGAGATTGAA
AAGCACATTA TTGAAACGGC CTTTGCCAAA GGTTATATCA AAGCCGAACA GCCATTGATC
CGTACGGGTA AAAAAGTTGC CGTTATTGGT TCAGGACCTG CTGGTCTGGC AGCTGCAGCG
CAGCTGAACA AAGCCGGCCA TGAGGTGGTG GTTTACGAGC GCGATGATAC ACCAGGTGGC
TTATTAAACT ACGGTATCCC TGATTTTAAA CTGCAAAAAG ATGTAGTAAC CAGGCGCATT
GCCTTAATGG AAAAAGAGGG CATTGTATTT AAATGTAATG CAAACGTAGG CGTAAATGTA
GAGCTGAATA CTTTATTAAG GGATTATCAG TCGATCATTC TTGCTGGTGG ATCAACCATT
CCACGTGATC TTCCTGCCAA AGGCAGGGAA GCCAAAGGGG TGCATTTTGC GATGGACTTT
TTAAAACAGC AGAATAAACG TGTAAGGGGC TTTGCGGTGG ATGGAGAAGA TATTTTAGCA
ACCGGAAAAG ACGTTATCGT GATTGGTGGT GGTGATACTG GATCTGATTG TATCGGTACC
TCTAACCGTC AGGGTGCCAA ATCGGTAACC CAGTTCGAGA TCATGCCGAT GCCTGCATCT
GCACGTACGT CAAATATGCC ATGGCCAACA TATCCGATGC TGTTAAAAGT AACTACATCA
CATGAAGAAG GCTGCGAAAG GGGCTGGGGT GTAAATACCA AGGAGTTTAT CAAAGATGAG
CAAGGCAACC TTAAAGCCGT AAAAGTAGTA GATGTGGAGT GGGATATTGA TGCTACAGGC
CGCCCCTTGA ATTTCAAGGA AAAACCTGGT ACAGAGCGCG ATCTGCCTTG TCAGCTGGTA
TTGCTGGCTA TGGGTTTCCT GCATCCGCAG AAAGAAGGTT TAATTGAAAA ATTAGGCGTG
GAAACCGATA ACAGGGGTAA TGTTAAAGCA GAAGAAGGTA AATATCAGAC CAATATTGCT
AAAATATTTG CTGCCGGCGA TATGCGCCGT GGACAATCAC TGGTTGTTTG GGCCATTTCT
GAGGGTAGGG AAGCTGCACG TAAAGTGGAC CAGTACCTGA TGGGGCATAG CAGTTTGCCG
TCTAAAGACG GTATCCCGTA TGCATAA
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| Protein sequence | MGKVTGFLEY ERTAPVKEDA KTRLKHYNEF VETFEAEQIN KQAARCMDCG VPFCQSGCPL
GNVIPEFNEA VYKGDWQLAT TILLSTNNFP EFTGRICPAP CESACVLGIN KSPVSIEEIE
KHIIETAFAK GYIKAEQPLI RTGKKVAVIG SGPAGLAAAA QLNKAGHEVV VYERDDTPGG
LLNYGIPDFK LQKDVVTRRI ALMEKEGIVF KCNANVGVNV ELNTLLRDYQ SIILAGGSTI
PRDLPAKGRE AKGVHFAMDF LKQQNKRVRG FAVDGEDILA TGKDVIVIGG GDTGSDCIGT
SNRQGAKSVT QFEIMPMPAS ARTSNMPWPT YPMLLKVTTS HEEGCERGWG VNTKEFIKDE
QGNLKAVKVV DVEWDIDATG RPLNFKEKPG TERDLPCQLV LLAMGFLHPQ KEGLIEKLGV
ETDNRGNVKA EEGKYQTNIA KIFAAGDMRR GQSLVVWAIS EGREAARKVD QYLMGHSSLP
SKDGIPYA
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