| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2127 |
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| Symbol | |
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| ID | 8253233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2448823 |
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| End bp | 2449569 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644935776 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003092393 |
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| Protein GI | 255532021 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.264822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATGA AACGTTTAGA AAACAAAATA GCCCTGGTAA CCGGCGGCGG CAGGGGTATG
GGAGCCAACA TTACGAAAAG ACTTGCGGCA GAGGGTGCTG CTGTGGTTTT GACCTATTCG
AAATCGGCAG AACAATCGGA AAGGATTGCA GCCGAAATTA ACCAGGCAGG AGGGCGGGCA
ATTGCCATCA AGGCAGATAG TGCCGATCCG GCGGAGCTGA CCAATGCTGT TGATAAAACC
ATCTCGGCAT TCGGGCACAT TGACATTATT GTAAACAATG CCGGTATTTA TGTAGGAAAA
GCTTTTGAGG AACATACGAT GGAAGATTAT GAGCAGGTGA TGGCAGTGAA TGTACGTGCT
GTATATGCAT CTGCGCTGGC AGCTGTAAAA CACATTCCTG ATGGTGGCCG GATCATTACG
ATTGGGAGCA ATATGGCCGA CAATGCAACA GGTCCGCATG CTACCCTGTA TGCAATGAGC
AAATCGGCCC TTAGCGGCTT TACGAAGGGA CTGGCGCGTG ACCTTGGGCC AAGGGACATC
ACCGTAAACC TGGTTCAGCC TGGCCCCATT AATACCGATA TGAACCCATC AGATACTGAA
CTGGCAGATT TTTTAAGAAG CCGGATGGCT TTGAAAGATT ATGGAACAGG AGATGATGTG
GCTGGACTGG TTGCTTTTCT GGCCAGTGAT GAAGGGAAGT ACATTACAGG CACAGCCCTT
ACCATTGATG GTGGCTTTAA CGCATAA
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| Protein sequence | MMMKRLENKI ALVTGGGRGM GANITKRLAA EGAAVVLTYS KSAEQSERIA AEINQAGGRA
IAIKADSADP AELTNAVDKT ISAFGHIDII VNNAGIYVGK AFEEHTMEDY EQVMAVNVRA
VYASALAAVK HIPDGGRIIT IGSNMADNAT GPHATLYAMS KSALSGFTKG LARDLGPRDI
TVNLVQPGPI NTDMNPSDTE LADFLRSRMA LKDYGTGDDV AGLVAFLASD EGKYITGTAL
TIDGGFNA
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