Gene Phep_2122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2122 
Symbol 
ID8253228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2445429 
End bp2445896 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content40% 
IMG OID644935771 
ProductActivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_003092388 
Protein GI255532016 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.413672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.611779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAA AAACTAAAGT TAATGCCGAA GCGGGCAAGC AGGAAATTGT GATTACAAGG 
GAATTTGATT TGCCATTGGA ATTGCTTTTT AAAGCATATG TAGAGGCCGA AATTGTTGAG
CAATGGATGG GCACAAAAGT ATTGCTGCTT GAGAATAAAA AACATGGAAG TTATGGCTTT
GAAACCAGGG ACCCTAAGGG AAATGTGGTA TTTAAAGCCA ATGGGGTAAT TCATGAATTT
GTTCCCGAAC AGAAAATCAC CCGGACATTT GAAATGGAGC GTACAGCTTT TGATGTTCAG
CTTGAATTTC TGGAATTTGA AGCACTGACT GAAGGCAGGA GTAAACTGAA CATGCAGGTG
ATATACAGGT CGGTAGCACT TAGGGACCAG CAACTAAAAT TGCCTTTTGC CATGGGTATC
AATATGGCAC ATAACCGGTT ACAGGAAGTC GTAAACAAAT TAAAATAA
 
Protein sequence
MEQKTKVNAE AGKQEIVITR EFDLPLELLF KAYVEAEIVE QWMGTKVLLL ENKKHGSYGF 
ETRDPKGNVV FKANGVIHEF VPEQKITRTF EMERTAFDVQ LEFLEFEALT EGRSKLNMQV
IYRSVALRDQ QLKLPFAMGI NMAHNRLQEV VNKLK