Gene Phep_2107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2107 
Symbol 
ID8253212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2427833 
End bp2428462 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content45% 
IMG OID644935756 
Producthypothetical protein 
Protein accessionYP_003092374 
Protein GI255532002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0267353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.306871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTA TTAAAAACGG CATTCTTGGT GGTTTTAGAG GCAAGGCCGG AACGGTAGTG 
GGCTACCACT TAAACGGACA GGACATTATG CGTGGCCTGG CAAATGAAAG AAGCAAACCA
TTTACAGAAA AAGAGCTGGC CAATCAGCAG GCCTTTGGAG ATCTGCAGCT TTGGCTGAAA
CCTTTAACAG TGTTTCTGAG AGTTGGCTTT CAGGATTATG CCCCTACATT TCAGGGTTTT
GTAGCTGCAA AATCCTATAA TTCTAAAAAT GCCCTGGTGA GGGATGATGC GGGTGCATAT
ATTGATCCGG CACTGGCGCT GGTTAGTTTT GGCGATCAGG AACCGGCATT AACAGCATCT
GCGGTTTCAG AAACTGAAAA TTCAATTACT TTTAACTGGG AAGGTGGTAA ATGTGAAAGT
GACGACCGGG CGATGTTTCT GGTATATGAT ATAGCTGGTG GCAAGGCCGA TTACGATACC
GGGGCCGTGA AGCGGAGAAT GAAGACCGGG ATTTTTAAAC TGAATGAGGA TTTTTCGGGA
AAGGCCGTTC ACGTTTACCT TGCCTTTGTA GCTGAAGACA GAAAAAGGCG CAGTAACAGC
CAGTATTTAG GCATTGTTAA TGTGCTTTAA
 
Protein sequence
MAIIKNGILG GFRGKAGTVV GYHLNGQDIM RGLANERSKP FTEKELANQQ AFGDLQLWLK 
PLTVFLRVGF QDYAPTFQGF VAAKSYNSKN ALVRDDAGAY IDPALALVSF GDQEPALTAS
AVSETENSIT FNWEGGKCES DDRAMFLVYD IAGGKADYDT GAVKRRMKTG IFKLNEDFSG
KAVHVYLAFV AEDRKRRSNS QYLGIVNVL