Gene Phep_2094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2094 
Symbol 
ID8253198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2414208 
End bp2414867 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content32% 
IMG OID644935742 
Productregulatory protein MarR 
Protein accessionYP_003092361 
Protein GI255531989 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0118468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACG ATATTTTAAA AAATGTCATC CATCTTCTTG AAGAATTTGA GTCGGAGAAT 
TTTTCAGGAA AAACATATCC TAATGATATC GAAGGTTTTA AAAGATGGGT AGTTGTCAAT
TATAAAAGCG CAGAAATAGA TAATGAACCC AATTGGGAAG GCAAAGAAAA GGGACGTAGT
GCTGAAAGTG TCATTAATAC TTTAATCGTT CATTTGAACA GGTATGCCAA GAGTTATTCA
AAATCGGCAA TATCCGGTTC AAATTTTTCT ACCCAGGAAG AATTTATTTA CCTCATTAAC
CTAAAAGCAT TCGGTGAGAT GACCAAAATG GACTTGATAA AAAAGAATGT CCATGAAAAA
CCTGCCGGAA TGCAGATTAT CAATCGGTTG ATTGCACAAG GCTGGGTAGA TCAAACTGAT
TCTGAAACTG ACAAAAGAAG TAAAGTTTTA AAAATCAGCA ATGAGGGCAT TAAAGTTTTA
GAAAATCAAA TGGGCAAAAT CAGAAAAGCA ACTGAAGTTG TGACAGGAGA TTTAACACGT
AAGGAAAAAA TGGAATTAAT TAGATTACTA AATAAACTCA ATGATTTTCA TCAGCCCATC
TATGATAAAA ATATTGAGCC TGAATATTTA TTAAATGAAG TTTTAAAAAA CAAAAGGTGA
 
Protein sequence
MKYDILKNVI HLLEEFESEN FSGKTYPNDI EGFKRWVVVN YKSAEIDNEP NWEGKEKGRS 
AESVINTLIV HLNRYAKSYS KSAISGSNFS TQEEFIYLIN LKAFGEMTKM DLIKKNVHEK
PAGMQIINRL IAQGWVDQTD SETDKRSKVL KISNEGIKVL ENQMGKIRKA TEVVTGDLTR
KEKMELIRLL NKLNDFHQPI YDKNIEPEYL LNEVLKNKR