| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2093 |
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| Symbol | |
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| ID | 8253197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2412727 |
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| End bp | 2414208 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644935741 |
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| Product | phytoene desaturase |
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| Protein accession | YP_003092360 |
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| Protein GI | 255531988 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.456364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00855511 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGAAGA AAATAGCCGT TATCGGTTCT GGTTTTTCGG GATTGTCTGC TGCCGCTTAT
TTGGCAAAAG CGGGAAACGA TGTTCAGGTT TTTGAAAAGC ACGACCAGCC GGGAGGAAGA
GCAAGGCAAT TTTCTACCCA ACAAGGTTAC ATTTTTGATA TGGGGCCAAG CTGGTACTGG
ATGCCTGATG TTATAGAAAG TTTTTTTGCT GATTTCGGTT ACAAAACTGC AGATTTTTTT
GAGTTGATTT CCTTAAACCC ACAGTTTGAG CTCATTTTTT CGGAAGAGAA AATCAATGTA
CCTGAAAGTA TAGAGGAACT AAAAATCTTG TTTGAACAAA TTGAAAAAGG TGCAGGCTTG
CAATTAGAGA AATTTATGCA ATCGGCGAAA TTTAAATATG AAGTCGGGAT GAAGGATTTT
GTGAACAAAC CTTGCCATAA TTGGTTGGAA TTCATTTCTC CTAAAATTGC TAAAAGTGCA
TTGAAATTGG ATTTGCTGAC GAATTTCAGA ACCTATGTTG GCAAATATTT TAAAAATGAA
AAATTAAGAA CATTGATGGA GTTCCCTGTA ATTTTTCTGG GCGCTTCTCC AAAAAACATT
CCGGCATTAT ATAGTTTGAT GAATTACGGG GGCTATGCTT TAGGAACGCA TTATCCGAAG
GGTGGCTTTT ATCAATTGGT ATTGGCGATG AAAAAAGTAG CCGAGAACCA AGGTGCAGCT
TTTCATTTTA ACAAGACAGT TGAAAATATA AATACGGATA ATGGTAAGGT ACGATCTTTA
ACCATCAATG GCGAAACCTA TGAATTTGAT GCTGTAGTTG CGTCTTCGGA TTATCACCAT
ACAGAAACAC TCTTAAATAA AGCGTATAGA AATTATTCAG AAGAATACTG GCAAAACAGA
ACATTTGCTC CATCCAGCTT GATCTATTAT TTGGGCATCA ATCAAACTAT TCCCGGCCTA
AAGCACCATA CCCTATTTTT TGAGCATGAT TTAGACGAAC ATATTGATTG TATCTATGGC
GAGAAAAAAT GGCCTGAAAA ACCACTGTTT TATGTTTGCT GCCCATCAAA AACAGATCAT
GCCGTTGCGC CCAAAGACAA AGAGAACCTA TTTCTTTTGA TGCCTTTGGC CATCGGAATA
AACGATGACG AATCCGTACG AAAAAAATAT TTAGCAGAAA TGATTTCAAG AATTGAAAGA
CATACAGGCC TAACCAATTT ACTGTCAAAG ATTGAATACA GAAAAAGCTA TTGTGTCAGC
GATTTTATTT CAGATTACAA TGCCTATGGT GGCAATGCTT ACGGATTGGC AAATACGCTT
AGTCAAACTG CGGTTTTGAA ACCAAAAATA AGAAACAAGA AATTAAAAAA TTTATTCTAT
ACGGGTCAGT TAACTGTTCC AGGGCCCGGA GTTCCTCCCT CCATTATATC GGGAAAAATT
GTAGCAAATG AGATAATTAA ATTTAAAAAC GAAGTATTAT GA
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| Protein sequence | MKKKIAVIGS GFSGLSAAAY LAKAGNDVQV FEKHDQPGGR ARQFSTQQGY IFDMGPSWYW
MPDVIESFFA DFGYKTADFF ELISLNPQFE LIFSEEKINV PESIEELKIL FEQIEKGAGL
QLEKFMQSAK FKYEVGMKDF VNKPCHNWLE FISPKIAKSA LKLDLLTNFR TYVGKYFKNE
KLRTLMEFPV IFLGASPKNI PALYSLMNYG GYALGTHYPK GGFYQLVLAM KKVAENQGAA
FHFNKTVENI NTDNGKVRSL TINGETYEFD AVVASSDYHH TETLLNKAYR NYSEEYWQNR
TFAPSSLIYY LGINQTIPGL KHHTLFFEHD LDEHIDCIYG EKKWPEKPLF YVCCPSKTDH
AVAPKDKENL FLLMPLAIGI NDDESVRKKY LAEMISRIER HTGLTNLLSK IEYRKSYCVS
DFISDYNAYG GNAYGLANTL SQTAVLKPKI RNKKLKNLFY TGQLTVPGPG VPPSIISGKI
VANEIIKFKN EVL
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