| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2087 |
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| Symbol | |
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| ID | 8253191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2408473 |
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| End bp | 2409777 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644935735 |
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| Product | Deoxyribodipyrimidine photo-lyase |
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| Protein accession | YP_003092354 |
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| Protein GI | 255531982 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0527605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0533895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGTA AAGTTTCGAT TTTTTGGTTT CGCAGAGATT TGCGTTTAGA AGATAATGTG
GGTTTATATC ATGCCTTATC TTCAGGGTTT CCTGTCCTTC CTATTTTTAT TTTCGATGAA
AATATCTTAG GAAAGCTTGG GGATAAAAAA GACAGAAGAG TGGATTATAT TGATCAGGCA
CTTTTGAAAA TAAATACCCA ACTAAAATTA TCCAAAACAA GGCTGAACAC ATTTCACGGA
AATCCGATTG AAATTTTCAA TATGCTTTCA GAGCAATATG CTGTCCAGGC TGTTTTTTGC
AACAGGGATT ATGAACCGCT AACTATTCAA AGAGATGTGG AAATTTATGA GTTTTTTAAA
CGGAACCAAA TTCCGTTTAA GGCATTTAAA GACCAGGTTA TTTTTGACAA AAGTGATGTT
TTAAAAAATG ATGGGACCCC CTATACGGTT TATACACCTT ATTCAAAAAA ATGGAAAGAG
CTATTGAAGG AAGAACATTA CAGGTCGTAC CATCCTGATT ATAATAATTT TTTCAGGCAA
GAGTTTACCG GAATTCATTC CTTGAACGAT ATTGGTTTTG AAAAAACAGA CATCGCCTTT
GAAACCCCGA AATTGACTAC TACAATCATT GATGAATACG ATAAATACAG AGATTATCCT
GCAATGCAAC GCACCACACA GTTGGGGATT GCCCTTCGGT TTGGCACCAT CAGCATTCGC
AAATGCGTAG CTTTTGGATT GAAACACAAT CAAACCTGGC TGAATGAATT AATTTGGCGG
GAATTTTTTA TGCAAATTTT GTATCATTTC CCTAAAGTGG TCGATCAATC TTTCAAATCG
AAATACGATA ATATCAAATG GCGAAACAAT GAGCATGAAT TTGATCGATG GTGCGAAGGG
AAAACAGGTT ACCCGATTGT AGATGCAGGA ATGAGACAGT TGAACCAAAC AGGTTTTATG
CACAATCGGG TACGGATGAT TGCAGCAAGC TTTTTGTGCA AGCATTTACT GATTGACTGG
CGTTGGGGTG AAGCTTATTT TGCACAAAAG TTGAACGATT ACGATTTGTC GGCCAATAAT
GGTAACTGGC AATGGGCATC AGGTTCGGGT TGCGATTCTG CACCTTATTT CAGGGTGTTT
AACCCAACGC TTCAAACCGA AAAATTCGAT AAAAACTTCG CTTACCTCAA AAAATGGATT
CCCGAGTTCG AAACAGAAAA CTATCCAGAA CCAATCGTGG AACATAGTTT TGCAAGAGAA
AGAGCTTTGA AAACATATGG CAATGCCATC AAAGAAAACG ATTAA
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| Protein sequence | MKSKVSIFWF RRDLRLEDNV GLYHALSSGF PVLPIFIFDE NILGKLGDKK DRRVDYIDQA
LLKINTQLKL SKTRLNTFHG NPIEIFNMLS EQYAVQAVFC NRDYEPLTIQ RDVEIYEFFK
RNQIPFKAFK DQVIFDKSDV LKNDGTPYTV YTPYSKKWKE LLKEEHYRSY HPDYNNFFRQ
EFTGIHSLND IGFEKTDIAF ETPKLTTTII DEYDKYRDYP AMQRTTQLGI ALRFGTISIR
KCVAFGLKHN QTWLNELIWR EFFMQILYHF PKVVDQSFKS KYDNIKWRNN EHEFDRWCEG
KTGYPIVDAG MRQLNQTGFM HNRVRMIAAS FLCKHLLIDW RWGEAYFAQK LNDYDLSANN
GNWQWASGSG CDSAPYFRVF NPTLQTEKFD KNFAYLKKWI PEFETENYPE PIVEHSFARE
RALKTYGNAI KEND
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