Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2084 |
Symbol | |
ID | 8253188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 2404625 |
End bp | 2406058 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644935732 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_003092351 |
Protein GI | 255531979 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.424143 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGTA CAGAATTTGA TGCAGTAGTT GTAGGTTCCG GCCCCAATGG CCTTGCAGCA GCAATAGCTA TGCAGCAACA AGGTTTATCG GTATTGATCA TTGAAGGCAA AGCCGAGATC GGAGGGGGAT TAAGGTCGGC CGGACTAACC TTACCTGGTT TTGTACATGA TGTTTGCTCG GCCGTTCACC CTCTGGCTAT AGGCTCTCCA TTTTTTAATA CATTGCCACT GCAGGATCAT GGTTTGATTT ACGCATTTCC GGATCTGGCT GCAGCGCACC CTTTTGATGA TGGTACTGCT GCGGTACTGG GCGGTTCAAT AGAGGAAACG GCGAAATTGC TGGGTAAAGA CGAACAGGCT TATTTAAAAC TGATCGGGCC TTTACTGCGC GACTGGCCGG ATATTGCTGA CGATGTTCTG GGGCCGCTGC ATTTCCCTAA ACATCCGCTT GCCATGGCCA GGTTTGGCTT AAATGCACTT ACTTCGGCTA CTTATTTAGC CAGGCGTTTT AAAACGAAGG CTGCCAAAGG CTTATGGGCC GGGATGGCGG CGCATGCTAT CCAGCCTTTA AGCAACCTCA GTACATCGGC CATCGGTCTG GTACTCATGG CTGCTGCCCA CTTAAAAGGC TGGCCTATAC CTGTCGGGGG CTCAAAAGAA ATTGCCAATG CCCTGTCCTC TTATTTTATC GCCATAGGCG GAAGAATTGA AACCGGCAGG TACATCAAAT CTTTAGAGGA GCTGCCCGCT GCAAAGGCAG TGCTTTTTGA TGTCACGCCG AAGCAATTGC TGCAAATTGC GGGACATAAA TTTTCTTCAG TTTACAAATG GCAGCTGGAA CGTTATCGCT ATGGAATGGG TGTTTTTAAG GTCGACTGGG CCCTGGATGC CCCAATTCCT TTTACTGCTG CCGAGGCCCG AAGGGCCGGC ACAGTTCATA TTGGCAACAC CATCGAGGAG ATCAGCTTAT CCGAAAAGCT GAGCTGGCAG GGCAAACATG CCGAAAAACC ATTTGTATTG CTGGCCCAGC AAAGCCTGTT TGATGATACA CGGGCACCCG AAGGAAAGCA TACGGCCTGG GCCTATTGTC ATGTGCCCAA TGGCTCACAA AAGGACATGA CCACAGCTAT AGAACAACAG GTAGAACGCT TTGCACCAGG TTTCAGAGAA AGGATCCTGG CCAGACATAC GATGAATACG GCACAGGTTG AAGACTATAA TCCCAACTAT ATTGGTGGCG ACATCAATGG AGGGGTAATC GACCTGGGAC AGATTTTCAC CCGTCCGGCC TTAAGAAGTT CCCCTTACCG GACATCTGCC AAAGGACTTT ACATCTGTTC TTCATCAACA CCACCAGGGG GTGGGGTACA TGGCATGTGT GGTTATCATG CCGCAAAAAG GACCCTTAAA GATATATTTT CCATTTCCAT TTAA
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Protein sequence | MSSTEFDAVV VGSGPNGLAA AIAMQQQGLS VLIIEGKAEI GGGLRSAGLT LPGFVHDVCS AVHPLAIGSP FFNTLPLQDH GLIYAFPDLA AAHPFDDGTA AVLGGSIEET AKLLGKDEQA YLKLIGPLLR DWPDIADDVL GPLHFPKHPL AMARFGLNAL TSATYLARRF KTKAAKGLWA GMAAHAIQPL SNLSTSAIGL VLMAAAHLKG WPIPVGGSKE IANALSSYFI AIGGRIETGR YIKSLEELPA AKAVLFDVTP KQLLQIAGHK FSSVYKWQLE RYRYGMGVFK VDWALDAPIP FTAAEARRAG TVHIGNTIEE ISLSEKLSWQ GKHAEKPFVL LAQQSLFDDT RAPEGKHTAW AYCHVPNGSQ KDMTTAIEQQ VERFAPGFRE RILARHTMNT AQVEDYNPNY IGGDINGGVI DLGQIFTRPA LRSSPYRTSA KGLYICSSST PPGGGVHGMC GYHAAKRTLK DIFSISI
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