Gene Phep_2084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2084 
Symbol 
ID8253188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2404625 
End bp2406058 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content49% 
IMG OID644935732 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003092351 
Protein GI255531979 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.424143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTA CAGAATTTGA TGCAGTAGTT GTAGGTTCCG GCCCCAATGG CCTTGCAGCA 
GCAATAGCTA TGCAGCAACA AGGTTTATCG GTATTGATCA TTGAAGGCAA AGCCGAGATC
GGAGGGGGAT TAAGGTCGGC CGGACTAACC TTACCTGGTT TTGTACATGA TGTTTGCTCG
GCCGTTCACC CTCTGGCTAT AGGCTCTCCA TTTTTTAATA CATTGCCACT GCAGGATCAT
GGTTTGATTT ACGCATTTCC GGATCTGGCT GCAGCGCACC CTTTTGATGA TGGTACTGCT
GCGGTACTGG GCGGTTCAAT AGAGGAAACG GCGAAATTGC TGGGTAAAGA CGAACAGGCT
TATTTAAAAC TGATCGGGCC TTTACTGCGC GACTGGCCGG ATATTGCTGA CGATGTTCTG
GGGCCGCTGC ATTTCCCTAA ACATCCGCTT GCCATGGCCA GGTTTGGCTT AAATGCACTT
ACTTCGGCTA CTTATTTAGC CAGGCGTTTT AAAACGAAGG CTGCCAAAGG CTTATGGGCC
GGGATGGCGG CGCATGCTAT CCAGCCTTTA AGCAACCTCA GTACATCGGC CATCGGTCTG
GTACTCATGG CTGCTGCCCA CTTAAAAGGC TGGCCTATAC CTGTCGGGGG CTCAAAAGAA
ATTGCCAATG CCCTGTCCTC TTATTTTATC GCCATAGGCG GAAGAATTGA AACCGGCAGG
TACATCAAAT CTTTAGAGGA GCTGCCCGCT GCAAAGGCAG TGCTTTTTGA TGTCACGCCG
AAGCAATTGC TGCAAATTGC GGGACATAAA TTTTCTTCAG TTTACAAATG GCAGCTGGAA
CGTTATCGCT ATGGAATGGG TGTTTTTAAG GTCGACTGGG CCCTGGATGC CCCAATTCCT
TTTACTGCTG CCGAGGCCCG AAGGGCCGGC ACAGTTCATA TTGGCAACAC CATCGAGGAG
ATCAGCTTAT CCGAAAAGCT GAGCTGGCAG GGCAAACATG CCGAAAAACC ATTTGTATTG
CTGGCCCAGC AAAGCCTGTT TGATGATACA CGGGCACCCG AAGGAAAGCA TACGGCCTGG
GCCTATTGTC ATGTGCCCAA TGGCTCACAA AAGGACATGA CCACAGCTAT AGAACAACAG
GTAGAACGCT TTGCACCAGG TTTCAGAGAA AGGATCCTGG CCAGACATAC GATGAATACG
GCACAGGTTG AAGACTATAA TCCCAACTAT ATTGGTGGCG ACATCAATGG AGGGGTAATC
GACCTGGGAC AGATTTTCAC CCGTCCGGCC TTAAGAAGTT CCCCTTACCG GACATCTGCC
AAAGGACTTT ACATCTGTTC TTCATCAACA CCACCAGGGG GTGGGGTACA TGGCATGTGT
GGTTATCATG CCGCAAAAAG GACCCTTAAA GATATATTTT CCATTTCCAT TTAA
 
Protein sequence
MSSTEFDAVV VGSGPNGLAA AIAMQQQGLS VLIIEGKAEI GGGLRSAGLT LPGFVHDVCS 
AVHPLAIGSP FFNTLPLQDH GLIYAFPDLA AAHPFDDGTA AVLGGSIEET AKLLGKDEQA
YLKLIGPLLR DWPDIADDVL GPLHFPKHPL AMARFGLNAL TSATYLARRF KTKAAKGLWA
GMAAHAIQPL SNLSTSAIGL VLMAAAHLKG WPIPVGGSKE IANALSSYFI AIGGRIETGR
YIKSLEELPA AKAVLFDVTP KQLLQIAGHK FSSVYKWQLE RYRYGMGVFK VDWALDAPIP
FTAAEARRAG TVHIGNTIEE ISLSEKLSWQ GKHAEKPFVL LAQQSLFDDT RAPEGKHTAW
AYCHVPNGSQ KDMTTAIEQQ VERFAPGFRE RILARHTMNT AQVEDYNPNY IGGDINGGVI
DLGQIFTRPA LRSSPYRTSA KGLYICSSST PPGGGVHGMC GYHAAKRTLK DIFSISI