Gene Phep_2071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2071 
Symbol 
ID8253175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2389819 
End bp2390625 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content41% 
IMG OID644935719 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_003092338 
Protein GI255531966 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.967882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.148335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAAC ACCCTAACTT TTTAAATATA AACAACCTGA AAGTCACCAT TTTCCAGGCT 
TATTTATTTT GGGAAAACAT TGATAAAAAC CTACAAAACC TTGCCTTACG TTTATCAACC
GGCGTTAAAG AGAAAACAGA CCTGATTGTG CTGCCCGAAA TGTTCAATAC AGGTTTTAGC
ATGAATGCGG AGGCGCTTGC CGAAGAAATG AATGGAAAGA CCATGCAATG GATGGCCGGG
ATTGCTGAAA AATATGAATG TGTTGTTGCC GGAAGCCTGA TCATTAAGGA AAACAACAAC
TATTACAACC GTTTGATCTG GATGCTGCCC GATGGTAAAT CAAGCCATTA TGATAAAAGA
CATTTGTTTG GTTTGGGTGA TGAGGATAAA AATTACAGTC CTGGTACCGA AAAAGTAATT
GTTGAATTAA AAGGTTGGAA GATCCGCCTG GCCATCTGTT ACGACCTTCG TTTTCCGGTA
TGGCTGCGCA ACCAACAGGA AGAATATGAT ATTTTATTGT TGATAGCCAG CTGGCCCGAT
AAAAGATCTG CACACTGGAA AGCACTTATT CCTGCAAGGG CTATTGAAAA CCAGAGTTAT
GTCATCGCGG CCAACCGTAT CGGACACGAT GGCAAAGAAG TATACTATAG CGGACATTCC
ATGTGTATAG ACCCAATGGG CAAAACTGTG TATTACAAGC CGGAAGATGA AGACCTCTAT
ACTTTTAGTA TTGGTTATGA AGAACTGGCC AAAACCCGTC AGAACTTCCC CTTTTTAAAA
GATGCAGATC ACTTTAAGAT CATTTAG
 
Protein sequence
MMEHPNFLNI NNLKVTIFQA YLFWENIDKN LQNLALRLST GVKEKTDLIV LPEMFNTGFS 
MNAEALAEEM NGKTMQWMAG IAEKYECVVA GSLIIKENNN YYNRLIWMLP DGKSSHYDKR
HLFGLGDEDK NYSPGTEKVI VELKGWKIRL AICYDLRFPV WLRNQQEEYD ILLLIASWPD
KRSAHWKALI PARAIENQSY VIAANRIGHD GKEVYYSGHS MCIDPMGKTV YYKPEDEDLY
TFSIGYEELA KTRQNFPFLK DADHFKII