Gene Phep_2069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2069 
Symbol 
ID8253173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2387042 
End bp2387923 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content43% 
IMG OID644935717 
ProductMethylenetetrahydrofolate dehydrogenase (NADP(+)) 
Protein accessionYP_003092336 
Protein GI255531964 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.615238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.146809 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTAC TAGACGGAAA ATTCGCATCA GAAAAGATTA AACAGGAAAT AGCAGCAGAA 
GCGGCAGACT TTTTAGCTAA AAGTGGCAGA AAGCCACACC TGATAGCAAT TTTAGTTGGT
AACGATGGCG GAAGCGAGAC TTACGTAGCC AGTAAAATGA AGAATTGTGA AAAGGTTGGT
TTCCAGTCTT CACTGATCAG GTATGATGTT ACCGTAACGG AAGCCGAACT ATTGCAAAAG
ATTGAAGAAA TTAACCAGGA TGCAGGCGTA GATGGCCTGA TTGTGCAGCT TCCCCTTCCC
AAACATATTG ACCCTGAAAA GGTAACCGAG AAAATTGATT ACCGTAAGGA TGTAGATGGT
TTCCATCCTG TAAATTTAGG CAGGATGATG CGCAACCTGC CCTGCTTTAT CCCGGCCACA
CCTTATGGTA TTTTATTGAT GCTGCAAGCC TATCAGATCG ATACTACCGG CAAACACTGC
GTAGTAGTTG GCCGCAGTAA TATAGTGGGC AGTCCGATGA GTATTTTGAT GGCACGCAAT
GCCAATCCTG GTAATTGTAC GGTAACACTT ACCCATAGTA AAACTTCCAA CTTAAAAGAA
CTTGTCCTGC AGGCCGATAT TATTGTTGCT GCAATTGGAA AAAAGAATTT TGTAACCGCT
GACATGGTTA AACCTGGCGC CATCATTATT GATGTGGGCA TCAACCGGGA AACCTCTGAT
CAGACCAAAT CCGGGTACAA GCTGTACGGA GATGTCGATT TTGAACATGT TGCAGCTAAA
TCTTCCTGGA TTACACCTGT TCCTGGCGGT GTTGGTTTAA TGACCATTGT AGGCCTGTTA
AAAAACACAC TGGCATCTGC AAAAGGAGAA ATTTACAGTT AA
 
Protein sequence
MQLLDGKFAS EKIKQEIAAE AADFLAKSGR KPHLIAILVG NDGGSETYVA SKMKNCEKVG 
FQSSLIRYDV TVTEAELLQK IEEINQDAGV DGLIVQLPLP KHIDPEKVTE KIDYRKDVDG
FHPVNLGRMM RNLPCFIPAT PYGILLMLQA YQIDTTGKHC VVVGRSNIVG SPMSILMARN
ANPGNCTVTL THSKTSNLKE LVLQADIIVA AIGKKNFVTA DMVKPGAIII DVGINRETSD
QTKSGYKLYG DVDFEHVAAK SSWITPVPGG VGLMTIVGLL KNTLASAKGE IYS