Gene Phep_2068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2068 
Symbol 
ID8253172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2386666 
End bp2387037 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content47% 
IMG OID644935716 
ProductRieske (2Fe-2S) domain protein 
Protein accessionYP_003092335 
Protein GI255531963 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.360129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.200679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTTG ACCTGAGATA TGACCGAGTT ATGAATAAAT TTAAATGGCA TAAAGTTGAG 
GGGGAACCGC AGGGAGAGGA TTTTGTGCGA CAGATTCAGA TAGAAGGGAA GAAGCTGTGT
CTGGTAAAAC ACCAGAACGA ATATTTCGTG GTACAGAATT ATTGTCCGCA TGCCGGTGGG
GTATTGAGCG GGGGCTGGTG CAAAAACGGA TACCTGGTTT GCCCTATTCA CCGCTGGGAA
TATAATTTAC ATACAGGCAG GGGTGCAGAA GGGCAGGGCG ATTACATCGA TACTTATCCC
GTTGAAATAA GGACCGACGG CATATATGTC GGGATAAAGG AAAGCTGGAT CAGCAGGCTG
TTTGGCCGCT GA
 
Protein sequence
MYLDLRYDRV MNKFKWHKVE GEPQGEDFVR QIQIEGKKLC LVKHQNEYFV VQNYCPHAGG 
VLSGGWCKNG YLVCPIHRWE YNLHTGRGAE GQGDYIDTYP VEIRTDGIYV GIKESWISRL
FGR