Gene Phep_2055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2055 
Symbol 
ID8253159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2372125 
End bp2372736 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content43% 
IMG OID644935703 
Productprotein of unknown function DUF151 
Protein accessionYP_003092322 
Protein GI255531950 
COG category[S] Function unknown 
COG ID[COG1259] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0271607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TAAAACTAGA TATTGTTGGT CTATCTTATA GCCAAACCCA GTCGGGCGCT 
TATGCGCTGG TACTGGGAGA AGTAAATGGC AGAAGGCGTT TGCCGATCAT TATTGGTGCC
TTTGAAGCGC AGGCGATAGC CATTGAAATA GAAAAGATGA CCCCAAGCAG GCCATTAACA
CACGACCTGT TCAAAACCTT TGCACAGATT TATAACATCG ATATCCAGGA GATCCTCATT
TACAACCTGG TAGAAGGCGT ATTTTATGCC AAGTTGATCT GTACTGACGG AAAAACAACC
CATGAAATTG ACGCCCGTAC CTCAGATGCC ATTGCCTTAG CTGTCCGGTT TAGTGCAGCC
ATTTATACCT ACGAGTTCAT CCTTTCCTCT GCAGGCATAG TCATAGAAGG CAATGATTTC
CTTTTTCTTG AAAACATCGA TAACATATCT AAAGAACAGG GCACGGAAGA CCTCTCTTCT
ATCCCTTCAT CAAGTTATAA GTCGCTTACC CTGGAAGAGC TTAACCAGAA ACTGCAGGAA
GCAATTGCAG AAGAAGCCTA CGAAAAAGCA GCCAGGATAC GTGATGAAAT CAATAAAAGA
GGATCAAAAT AG
 
Protein sequence
MKKVKLDIVG LSYSQTQSGA YALVLGEVNG RRRLPIIIGA FEAQAIAIEI EKMTPSRPLT 
HDLFKTFAQI YNIDIQEILI YNLVEGVFYA KLICTDGKTT HEIDARTSDA IALAVRFSAA
IYTYEFILSS AGIVIEGNDF LFLENIDNIS KEQGTEDLSS IPSSSYKSLT LEELNQKLQE
AIAEEAYEKA ARIRDEINKR GSK