| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2043 |
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| Symbol | |
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| ID | 8253147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2360034 |
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| End bp | 2360933 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644935691 |
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| Product | Histone deacetylase |
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| Protein accession | YP_003092310 |
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| Protein GI | 255531938 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0169314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0046378 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTTAAAA TAGCCTGGCA TCCTTTATAT GCCCACCCGC TTCCCGAAGG ACATCGTTTT
CCGATGATCA AATACGAACT GATCCCAGGA CAGTTGTTAC ATGAGGGGCT GATCAGCGCA
GCTAATTTAT TTGAGCCGGG CTTGCTTGAG GAAGAGGTTG TCTTGTATGC GCATCAAAAG
GCTTATTGGG AGCAGCTAAA ATCACTCAGT TTGCCTGCCA GGGAACAACG CAGGATAGGT
TTTCCTTTAA CAGCACAACT ACTGGAGCGG GAAATCAGGA TTGCAAAGGG TACAGTTGAT
GGTTCCGGGT ACGCGCTGCA ATATGGAATT GCCTTTAATG TTGCTGGTGG TACACACCAT
GCCGGCAGCA ACTGGGGAGA AGGATTTTGT TTGCTGAACG ATCAGGCGAT TGCAGCAAAC
TATTTGTTAA ATAACGGGTT GGCAAAGCAT ATCTTAATAA TTGATTTAGA TGTGCACCAG
GGCAATGGCA CTGCCGAGAT TTTTGAAAAT GAGCCCAGGG TGTTTACCTT TTCCATGCAT
GGCGATAAGA ATTTCCCTTT CAGGAAAGAA AAGTCTGACC TGGATATTGC TTTGGGAGAT
GGAACAGGGG ATGCTGAATT TTTAAGTAAG CTGAAAGAAA GCTTACCTTT GCTTTTGGCC
CATCGGCCTG ACTTTGTATT TTACCTTTCG GGGGTGGATG TACTGGCCAG CGATAAGCTG
GGTAAGCTGG CCCTGAGCAA AGAAGGCTGC AGGGAGAGGG ACAGAATGGT ACTGCAGTTT
TGTAAAGACC ATCATTTGCC GGTGCAGGTA AGTATGGGTG GTGGCTATTC GCCGGCTATT
AAGGACATTG TGGATGCACA TTGCAGTACG TTTAAAATTG GTTTAGATAT TTTTGAATAA
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| Protein sequence | MVKIAWHPLY AHPLPEGHRF PMIKYELIPG QLLHEGLISA ANLFEPGLLE EEVVLYAHQK
AYWEQLKSLS LPAREQRRIG FPLTAQLLER EIRIAKGTVD GSGYALQYGI AFNVAGGTHH
AGSNWGEGFC LLNDQAIAAN YLLNNGLAKH ILIIDLDVHQ GNGTAEIFEN EPRVFTFSMH
GDKNFPFRKE KSDLDIALGD GTGDAEFLSK LKESLPLLLA HRPDFVFYLS GVDVLASDKL
GKLALSKEGC RERDRMVLQF CKDHHLPVQV SMGGGYSPAI KDIVDAHCST FKIGLDIFE
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