| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2040 |
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| Symbol | |
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| ID | 8253144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2358061 |
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| End bp | 2358537 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644935688 |
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| Product | gafA; GAF domain-containing protein |
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| Protein accession | YP_003092307 |
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| Protein GI | 255531935 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1956] GAF domain-containing protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.102086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00649969 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGAAG ACCTGATCAT TGCAACAAAT GTAAACAAAG AAGCTCAATA CCAATCTTTA
ATTCCACAAA TTAAAGCCCT GATTGATGGT GAAGATGATC AGATTGCCAA CCTGGCTAAT
ATCGCTGCAG CTTTAAAAGA GCAGTTTAAA TGGTTTTGGG TGGGTTTCTA TCTGGTTAAA
GGAGGTGAAT TGGTGCTTGG TCCATTTCAG GGACCTGTAG CCTGTACCCG CATCAACAAA
GGAAAGGGTG TTTGTGGGGC ATCATGGCAA CAGGATGAAA CGCTGATTGT GCCTGATGTG
GATGCTTTTC CCGGGCATAT TGCCTGCGCA TCTGCTTCAA GATCGGAAAT AGTATTGCCC
TTGCATAAAG GAAATGAAGT AATTGGAGTT CTGGATGTAG ACAGTGAACA TCTTGCTCAT
TTTGATGATG TTGATGCCAG ATACCTGCAG CAAATAATTA ACTTGTTAAA TGGCTAA
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| Protein sequence | MAEDLIIATN VNKEAQYQSL IPQIKALIDG EDDQIANLAN IAAALKEQFK WFWVGFYLVK
GGELVLGPFQ GPVACTRINK GKGVCGASWQ QDETLIVPDV DAFPGHIACA SASRSEIVLP
LHKGNEVIGV LDVDSEHLAH FDDVDARYLQ QIINLLNG
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