| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2029 |
|---|
| Symbol | |
|---|
| ID | 8253133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 2338198 |
|---|
| End bp | 2338947 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644935677 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_003092296 |
|---|
| Protein GI | 255531924 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.537648 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00313988 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATA GTTTGAAATC TACAATTAAG AAGAACCTGC CTGTTTTTGT AAAACGTTTT
ATAAATCGTA TTGGCTTATA TCAGGGATTT GTACCTCCAC AGGGCAAAAT CAGTTGGGGA
GATTTTAATT CTGTAATGCC ATTTAGTAAT GATTTTGGTT TTGATCGTGG CGGTGCTGTA
GATCGTTATT ATATTGAAAA ATTTTTGGAT GAACAATCCG TTCACATCAA GGGTAATGTT
CTGGAGATTG CAGACAATGC CTATACATTA AAATATGGTG GTAGCAACGT TACCAAAAGT
GATGTATTAC ATTTAAATGC CGGCACACCT GGTGCTACCT ATATTGGGGA TTTGAGTAAA
GGGGAGCATT TACCTTCGGA ACATTTTGAT TGTATTATAC TTACACAAAC ACTACATCTC
ATTTATGATT ATACTTCCGC ACTAAAACAT TGTTACCGGA TTCTCAAAAA AGATGGCATA
TTGTTAATAA CAACTCCGGG AATAAGTCAA ATCGATCGGG GAGAATGGGG TCAATACTGG
CTATGGTCAT TTAATGAGCA CTCTATGAAG CGTATTTTGA CGGAGCTATT CCCTGCAAAC
AGTTTTCAGA TACAAACTTA TGGTAACGTA TATGCAGCTA CAACTTTTTT ATATGGAGCT
GGACTGTCTG AAGTGGATCA ATCAAAGCTT GATGTAAGGG ATACAGCATA TAGTGTCATT
GTTGGCGTTC AATTAAAAAA ACAGGCTTAA
|
|---|
| Protein sequence | MINSLKSTIK KNLPVFVKRF INRIGLYQGF VPPQGKISWG DFNSVMPFSN DFGFDRGGAV
DRYYIEKFLD EQSVHIKGNV LEIADNAYTL KYGGSNVTKS DVLHLNAGTP GATYIGDLSK
GEHLPSEHFD CIILTQTLHL IYDYTSALKH CYRILKKDGI LLITTPGISQ IDRGEWGQYW
LWSFNEHSMK RILTELFPAN SFQIQTYGNV YAATTFLYGA GLSEVDQSKL DVRDTAYSVI
VGVQLKKQA
|
|---|
| |