| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2027 |
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| Symbol | |
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| ID | 8253131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2336342 |
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| End bp | 2337208 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644935675 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_003092294 |
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| Protein GI | 255531922 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.514923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00368747 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAATA ACAAAAACGA AGATACAACT GCAGATTGGC AATGGGAAAT AAATGGTACT
CCAGCCTGGT TTAAGTTAGG CCTGCGCGAC CTTTATGCCT ATAGAGGATT AATTATGCGT
TTTGTGCGCC GTGATTTAAT TGCCAGTTAC CAGCAAACCA TAATTGGCCC CATATGGATG
TTTTTGCAGC CTCTCTTAAC TACTTTAATT TATTTGATTG TGTTCGGCAG TTTTGCTAAG
GTATCAACTG ATGGTGTTCC TAAAATACTA TTCTATTTGT CTGGTACCAT CATCTGGACT
TTCTTTTTCG ATAACATCTC TGGCACTATG TATACGTTCA TCACCAATGC AGAAATTTTT
AGTAAAGTAT ACTTCCCCAG GTTAATTATG CCAGTAAGCA ACATTATCAC TCAATCAGTA
AGACTATCCA TACAATTTTT ATTGTTTATC ATTATATTTT TGTATTACCA CATCGTGTAT
CATCAGTTTC AGCTCACAAC ATCATTGCTT CTTATTCCAT TTCTAATTGT ATTAACCGCT
GCGTTTGCAT TAGGTACTGG TCTATTGATT TCAGTTTTTA CAGCACGATA CAGAGATGTA
GATACTTTTT TTCAATATAT ACTCCGCTTA GGTATGTTTG TTACCCCAGT GGTTTTTCCC
AGTTCCATTG TGCCATTAAA ATATCAGTTT CTATTTTGGT TAAACCCCTT AACTCCTATT
ATAGAAACAT TCAGGGCCAT GTTTTTCAAT GTAGGAACAA TACAATATCA GTATTTGTTG
TTGGCTACTG TTAATACTAC TATTTTATTA ATACTGGGTC TGGTCTTATT TAAAAGACGC
GAAACAGAGG TAATGGACAT TATTTAA
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| Protein sequence | MNNNKNEDTT ADWQWEINGT PAWFKLGLRD LYAYRGLIMR FVRRDLIASY QQTIIGPIWM
FLQPLLTTLI YLIVFGSFAK VSTDGVPKIL FYLSGTIIWT FFFDNISGTM YTFITNAEIF
SKVYFPRLIM PVSNIITQSV RLSIQFLLFI IIFLYYHIVY HQFQLTTSLL LIPFLIVLTA
AFALGTGLLI SVFTARYRDV DTFFQYILRL GMFVTPVVFP SSIVPLKYQF LFWLNPLTPI
IETFRAMFFN VGTIQYQYLL LATVNTTILL ILGLVLFKRR ETEVMDII
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