Gene Phep_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2017 
Symbol 
ID8253121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2323301 
End bp2324275 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content37% 
IMG OID644935665 
Productglycosyl transferase family 2 
Protein accessionYP_003092284 
Protein GI255531912 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000864394 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATCTTC AAAAACTGGT TACAGTAATT ATCCCTACTT ATAACAGAGA AAAAAAACTT 
CCTGAGGCTA TTGAAAGTGC ATTAAATCAG TCCTATCAAA ATATCCAAAT AATAGTAGTA
GATGACGGCT CAATTGATCA AACAGGAAAA CTTGTTAAAG AAGAATATCC TGGGGTAGAA
TACTATTATA AAGAAAATGG CGGTCAGGCT TCAGCAAGAA ACCTGGGATT AAAACATGCT
AAAGGAGATA TTATCGCATC TCTAGACTCT GATGACATCT GGTATACGGA TTTCCTTAAA
AATTGTGTTG AAAAACTGGA AACAGATAAA CTTGACTTTG TTTTTGCCAA CTGGGATCAG
GATACAAAAG CTGGCGACAG CTGGGATTTC CTGAATAAGG ATCCATTCTT AACTCCATAT
TTATATAAAG AAAAAGACGA ATGGATCGAT TTGAACTATG ACGAAGTAAG GGAGCTGTAT
ATTAAGTCCT GCCCTTCCCC TTCATCTTCA TTAGTGATGA GAAAATCTTC CATTGTATCC
GGATGGGATG AGGAAATGAA CATCGGGGAC GACTGGTGTT TGTATCTTGA AATGATATTG
ACCAAAGAAT GCCGGGCCGC TTTTACGTTA ACTAAATTAT GGCATAAAAG GATCGACGAG
ATCAATGTTT ATGATGGCAG AAAATGGAGT GAGGTGGTTG AATTCTTATA CATTGCTGAT
GCAAAGGCAA AGCTTATTAA ATTTGATAAG CTGCTCAGCC CGAAAGAAAG AAAAACCCTG
GAACAAAGGT ATATGATAGG GTTGGTTGAG TTTGCCAAAC ACAATTTAAT CCGTGAACTT
AACCTCAAAT ATTCGTTCAT TTTGCTGATC AGGTCATTTG CTGTGAACAT CCCCTTCACC
CTAAAAGAAA TTCCTAAGGT TTTTATCGCG GGCCTACAAA ACAAAAATAA AAAACTAAAA
AAGTTGTTGA CGTAA
 
Protein sequence
MNLQKLVTVI IPTYNREKKL PEAIESALNQ SYQNIQIIVV DDGSIDQTGK LVKEEYPGVE 
YYYKENGGQA SARNLGLKHA KGDIIASLDS DDIWYTDFLK NCVEKLETDK LDFVFANWDQ
DTKAGDSWDF LNKDPFLTPY LYKEKDEWID LNYDEVRELY IKSCPSPSSS LVMRKSSIVS
GWDEEMNIGD DWCLYLEMIL TKECRAAFTL TKLWHKRIDE INVYDGRKWS EVVEFLYIAD
AKAKLIKFDK LLSPKERKTL EQRYMIGLVE FAKHNLIREL NLKYSFILLI RSFAVNIPFT
LKEIPKVFIA GLQNKNKKLK KLLT