Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2017 |
Symbol | |
ID | 8253121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2323301 |
End bp | 2324275 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644935665 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003092284 |
Protein GI | 255531912 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000864394 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATCTTC AAAAACTGGT TACAGTAATT ATCCCTACTT ATAACAGAGA AAAAAAACTT CCTGAGGCTA TTGAAAGTGC ATTAAATCAG TCCTATCAAA ATATCCAAAT AATAGTAGTA GATGACGGCT CAATTGATCA AACAGGAAAA CTTGTTAAAG AAGAATATCC TGGGGTAGAA TACTATTATA AAGAAAATGG CGGTCAGGCT TCAGCAAGAA ACCTGGGATT AAAACATGCT AAAGGAGATA TTATCGCATC TCTAGACTCT GATGACATCT GGTATACGGA TTTCCTTAAA AATTGTGTTG AAAAACTGGA AACAGATAAA CTTGACTTTG TTTTTGCCAA CTGGGATCAG GATACAAAAG CTGGCGACAG CTGGGATTTC CTGAATAAGG ATCCATTCTT AACTCCATAT TTATATAAAG AAAAAGACGA ATGGATCGAT TTGAACTATG ACGAAGTAAG GGAGCTGTAT ATTAAGTCCT GCCCTTCCCC TTCATCTTCA TTAGTGATGA GAAAATCTTC CATTGTATCC GGATGGGATG AGGAAATGAA CATCGGGGAC GACTGGTGTT TGTATCTTGA AATGATATTG ACCAAAGAAT GCCGGGCCGC TTTTACGTTA ACTAAATTAT GGCATAAAAG GATCGACGAG ATCAATGTTT ATGATGGCAG AAAATGGAGT GAGGTGGTTG AATTCTTATA CATTGCTGAT GCAAAGGCAA AGCTTATTAA ATTTGATAAG CTGCTCAGCC CGAAAGAAAG AAAAACCCTG GAACAAAGGT ATATGATAGG GTTGGTTGAG TTTGCCAAAC ACAATTTAAT CCGTGAACTT AACCTCAAAT ATTCGTTCAT TTTGCTGATC AGGTCATTTG CTGTGAACAT CCCCTTCACC CTAAAAGAAA TTCCTAAGGT TTTTATCGCG GGCCTACAAA ACAAAAATAA AAAACTAAAA AAGTTGTTGA CGTAA
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Protein sequence | MNLQKLVTVI IPTYNREKKL PEAIESALNQ SYQNIQIIVV DDGSIDQTGK LVKEEYPGVE YYYKENGGQA SARNLGLKHA KGDIIASLDS DDIWYTDFLK NCVEKLETDK LDFVFANWDQ DTKAGDSWDF LNKDPFLTPY LYKEKDEWID LNYDEVRELY IKSCPSPSSS LVMRKSSIVS GWDEEMNIGD DWCLYLEMIL TKECRAAFTL TKLWHKRIDE INVYDGRKWS EVVEFLYIAD AKAKLIKFDK LLSPKERKTL EQRYMIGLVE FAKHNLIREL NLKYSFILLI RSFAVNIPFT LKEIPKVFIA GLQNKNKKLK KLLT
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