| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2016 |
|---|
| Symbol | |
|---|
| ID | 8253120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 2322170 |
|---|
| End bp | 2323267 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644935664 |
|---|
| Product | Glutamine--scyllo-inositol transaminase |
|---|
| Protein accession | YP_003092283 |
|---|
| Protein GI | 255531911 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.288429 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.000869808 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTTA CAATACCATA CGAAAATTTA AAAACGCTCA ATAGACCATT TGAAGCTGCG
TTTAAACAAA AATTTACCGA TTTTCTGGAC GCCGGCTGGT ATATACTAGG AAAAGAGGTA
ACCAAATTTG AAGAAGAATT TGGCGACTAT CATAACGAAC AATACGTTGT TGGTGTAGCC
AATGGACTGG ATGCACTAAT CCTTTCCTTA AAGGCCTGCG ACTTTAAAGA TGGGGATGAA
ATTATAGTTC CCTCTAATAC TTACATTGCT ACAATCTTAT CTATTGTGCA TTGCGGTTTG
GTACCGGTCC TGGTTGAGCC CGATATCAAC ACTTATAACA TCGATCCACA AAAAATTGAA
GATGCCGTCA CTGAACGAAC AGTAGCCATA ATGGTTGTCC ATCTCTATGG CCAGTGCTGT
GAAATGGATC CGATACTTTC GATCTGTAAA AACAAAAACC TGAAGCTAAT AGAAGACTGT
GCCCAGGCAC ATGGTGCTAC TTATAAGGGA AAACTTGCGG GAACTTTCGG AGATTTTGGT
GCATTTAGCT TCTATCCTAC AAAGAATTTA GGCGCCTTAG GCGATGCAGG AGCATTAATC
TGCAAGTCAG AGAAACATTA CCAAAAACTG AGACAGCTGA GGAATTACGG TTCCGAAAAG
AAATACCACA ATGAAATTGT TGGCTATAAT TCAAGATTAG ATGAAATACA GGCCGCGTTT
TTAAGGATAA AACTTCCTTA CTTAAATGAG ATCAATCTTC ATAAGAAGAA ACTGGCCGCC
ATTTATCTTT CAGAATTAAG TGATAATTTC ATAAAGCCAG TAGTAAATAA TGATTTTAGT
AATGTTTATC ATATATTTAA CATCAGACAT CCCGAGCGTG ACAGGTTAAA GGCTTATTTG
CTGGAAAATC GGATCGGAAC AGAAATTCAT TATCCTATTG CTCCGCATAA ACAGAAAGCG
CTAAAGTTTA TGAACCATTT AAATTATCCG GTTTCTACAG AAATTCACAA TACTACATTG
AGTTTACCTT GTTCTTTTGC CCATACTGTT GAAGATATCC ATTATGTTGT TGAAACTTTA
AATAATTTTA TTTTATAA
|
|---|
| Protein sequence | MSLTIPYENL KTLNRPFEAA FKQKFTDFLD AGWYILGKEV TKFEEEFGDY HNEQYVVGVA
NGLDALILSL KACDFKDGDE IIVPSNTYIA TILSIVHCGL VPVLVEPDIN TYNIDPQKIE
DAVTERTVAI MVVHLYGQCC EMDPILSICK NKNLKLIEDC AQAHGATYKG KLAGTFGDFG
AFSFYPTKNL GALGDAGALI CKSEKHYQKL RQLRNYGSEK KYHNEIVGYN SRLDEIQAAF
LRIKLPYLNE INLHKKKLAA IYLSELSDNF IKPVVNNDFS NVYHIFNIRH PERDRLKAYL
LENRIGTEIH YPIAPHKQKA LKFMNHLNYP VSTEIHNTTL SLPCSFAHTV EDIHYVVETL
NNFIL
|
|---|
| |