Gene Phep_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2015 
Symbol 
ID8253119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2321522 
End bp2322163 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content44% 
IMG OID644935663 
Producthypothetical protein 
Protein accessionYP_003092282 
Protein GI255531910 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.293977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00160797 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGAAGAT ATAAGAATGG AATAACCGGG CCTGTTAGGG GCAAAATTGG AAACGTGGTG 
GGGAGCACCT GGCGGGGCAT AGCTGTGTTA AAAAGCCTGG CAGAACCCAG TACGAAAGCG
CCATCAGAAA AACAGCTAAA CCAGCGCTTT GTATTTGCAA TGGTAAACGC CTGGTTAAAA
CCCCTGAGAG ACTTGATATG GATTGGTTTC CAGATTTTCA CCGGCACAAA AACGCCTATG
AACGGAGCTG TGTCATTATT GCTGAAAGAA GCAGTAACAG GTAACAGCAG GGAAAACTAT
GCCATAGATT TTGCAAAAGT AATACTGAGC AGGGGAGAGT TGCTGATATC GCTGATTAAA
CAGGTACTGG TATTAATAGA CAGCGTGCTG CAGATTAAGT GGGAAAACCC ATCGGCCTCC
GTTTTTTGCC AAGCCAATGA TAAAGCGACT GTGGTGGTGT ACAATAATGC AAAGCAAAAG
TTTGTGATAT TTAAGGATGT GGCAAAACGG GCTGATGAAC AGGTAGATTT ACAGTTGCCT
GCTGATTTTG CCGGAGATGC TATACATGCA TGGATGCACT ATGTAAGTAT GGAAGGAGAT
GCGGTGAGTA CGAGTGTTTA TATCGGTGAA TATGTGATAT AA
 
Protein sequence
MGRYKNGITG PVRGKIGNVV GSTWRGIAVL KSLAEPSTKA PSEKQLNQRF VFAMVNAWLK 
PLRDLIWIGF QIFTGTKTPM NGAVSLLLKE AVTGNSRENY AIDFAKVILS RGELLISLIK
QVLVLIDSVL QIKWENPSAS VFCQANDKAT VVVYNNAKQK FVIFKDVAKR ADEQVDLQLP
ADFAGDAIHA WMHYVSMEGD AVSTSVYIGE YVI