Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2015 |
Symbol | |
ID | 8253119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 2321522 |
End bp | 2322163 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644935663 |
Product | hypothetical protein |
Protein accession | YP_003092282 |
Protein GI | 255531910 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.293977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00160797 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGAAGAT ATAAGAATGG AATAACCGGG CCTGTTAGGG GCAAAATTGG AAACGTGGTG GGGAGCACCT GGCGGGGCAT AGCTGTGTTA AAAAGCCTGG CAGAACCCAG TACGAAAGCG CCATCAGAAA AACAGCTAAA CCAGCGCTTT GTATTTGCAA TGGTAAACGC CTGGTTAAAA CCCCTGAGAG ACTTGATATG GATTGGTTTC CAGATTTTCA CCGGCACAAA AACGCCTATG AACGGAGCTG TGTCATTATT GCTGAAAGAA GCAGTAACAG GTAACAGCAG GGAAAACTAT GCCATAGATT TTGCAAAAGT AATACTGAGC AGGGGAGAGT TGCTGATATC GCTGATTAAA CAGGTACTGG TATTAATAGA CAGCGTGCTG CAGATTAAGT GGGAAAACCC ATCGGCCTCC GTTTTTTGCC AAGCCAATGA TAAAGCGACT GTGGTGGTGT ACAATAATGC AAAGCAAAAG TTTGTGATAT TTAAGGATGT GGCAAAACGG GCTGATGAAC AGGTAGATTT ACAGTTGCCT GCTGATTTTG CCGGAGATGC TATACATGCA TGGATGCACT ATGTAAGTAT GGAAGGAGAT GCGGTGAGTA CGAGTGTTTA TATCGGTGAA TATGTGATAT AA
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Protein sequence | MGRYKNGITG PVRGKIGNVV GSTWRGIAVL KSLAEPSTKA PSEKQLNQRF VFAMVNAWLK PLRDLIWIGF QIFTGTKTPM NGAVSLLLKE AVTGNSRENY AIDFAKVILS RGELLISLIK QVLVLIDSVL QIKWENPSAS VFCQANDKAT VVVYNNAKQK FVIFKDVAKR ADEQVDLQLP ADFAGDAIHA WMHYVSMEGD AVSTSVYIGE YVI
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