Gene Phep_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2013 
Symbol 
ID8253117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2320172 
End bp2320813 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content46% 
IMG OID644935661 
Producthypothetical protein 
Protein accessionYP_003092280 
Protein GI255531908 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.174769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000784193 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCAAGT ACAAAAAGGG CATCCTCGGC CCCTTCAGAG GAAAGGTTGG CACAACCGTA 
GGATCTAGCT GGAACGGAAT TTTTTACCTG AAAAGTTTAC CAGATTTTGG GGACTATGTG
CCCAGCACAG CACAGTTAAA TGTGCAGGCC AAAATGGCCT TTGTAACCGG CTTTTTGAAG
CCACTTAAAC CACTGCTGAA CATAGGTTAT AAGCTGTTTA ACAAGGGCAT TACGCCGATG
AACGCCGCCA CTTCTTATCA CCTGAAGAAT GCGGTTACGG GTACCAGTGC CCTGAACTAT
GCCATTGATT ATACCAAGGT AATGATCAGT GAAGGCAATT TGCCTGTAGC CGATGATCCT
GAGGTGAACG TTACAGTTGC CAACCAGCTG AACTTTAGCT GGGTTGACGA TTCGGACCCG
GAGAGTACCA ACGATACGGA TATGCTTACT GTACTGGCCA TTAATCCCAC AAAAGGGAAT
TATACCAAAA AGGTTAATGC TGTACCAAGA TCGGCCCAAG CTTATGTGCT TCCGGTACCA
GGTTATAGTG GTGACGAGGT GCAGGTGTAT CTGTTTTTTG TGAGTGCTGA TGGTAAACAG
GTGAGTGATA GTGTGTATGT AGGGGAGTTT ATAGTGCTTT AA
 
Protein sequence
MGKYKKGILG PFRGKVGTTV GSSWNGIFYL KSLPDFGDYV PSTAQLNVQA KMAFVTGFLK 
PLKPLLNIGY KLFNKGITPM NAATSYHLKN AVTGTSALNY AIDYTKVMIS EGNLPVADDP
EVNVTVANQL NFSWVDDSDP ESTNDTDMLT VLAINPTKGN YTKKVNAVPR SAQAYVLPVP
GYSGDEVQVY LFFVSADGKQ VSDSVYVGEF IVL