Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2013 |
Symbol | |
ID | 8253117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 2320172 |
End bp | 2320813 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644935661 |
Product | hypothetical protein |
Protein accession | YP_003092280 |
Protein GI | 255531908 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.174769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000784193 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGCAAGT ACAAAAAGGG CATCCTCGGC CCCTTCAGAG GAAAGGTTGG CACAACCGTA GGATCTAGCT GGAACGGAAT TTTTTACCTG AAAAGTTTAC CAGATTTTGG GGACTATGTG CCCAGCACAG CACAGTTAAA TGTGCAGGCC AAAATGGCCT TTGTAACCGG CTTTTTGAAG CCACTTAAAC CACTGCTGAA CATAGGTTAT AAGCTGTTTA ACAAGGGCAT TACGCCGATG AACGCCGCCA CTTCTTATCA CCTGAAGAAT GCGGTTACGG GTACCAGTGC CCTGAACTAT GCCATTGATT ATACCAAGGT AATGATCAGT GAAGGCAATT TGCCTGTAGC CGATGATCCT GAGGTGAACG TTACAGTTGC CAACCAGCTG AACTTTAGCT GGGTTGACGA TTCGGACCCG GAGAGTACCA ACGATACGGA TATGCTTACT GTACTGGCCA TTAATCCCAC AAAAGGGAAT TATACCAAAA AGGTTAATGC TGTACCAAGA TCGGCCCAAG CTTATGTGCT TCCGGTACCA GGTTATAGTG GTGACGAGGT GCAGGTGTAT CTGTTTTTTG TGAGTGCTGA TGGTAAACAG GTGAGTGATA GTGTGTATGT AGGGGAGTTT ATAGTGCTTT AA
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Protein sequence | MGKYKKGILG PFRGKVGTTV GSSWNGIFYL KSLPDFGDYV PSTAQLNVQA KMAFVTGFLK PLKPLLNIGY KLFNKGITPM NAATSYHLKN AVTGTSALNY AIDYTKVMIS EGNLPVADDP EVNVTVANQL NFSWVDDSDP ESTNDTDMLT VLAINPTKGN YTKKVNAVPR SAQAYVLPVP GYSGDEVQVY LFFVSADGKQ VSDSVYVGEF IVL
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