Gene Phep_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1998 
Symbol 
ID8253102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2307751 
End bp2308173 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content45% 
IMG OID644935648 
Producthypothetical protein 
Protein accessionYP_003092267 
Protein GI255531895 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.295349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00232956 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACATAC TGCCATACAT TGCTGCTTTG GAAAAGGTAC TTGCAGAATT GCCGGAAAAA 
GGTCATTTGC TTACCCTGCG TGAATATGCC CTGGACGACC GAATCTTGCT GCACAAAATG
ATATTCCGTT TTTTAGATTT TAGTTACGCG GAAACAGTTT ACCTGCTGAA AGGGCTGATC
ATTTACCAGC AGCGCTGGGG TGATTTAAAT GAAATTGCAA AAGAAGGGAT AAGAGAAGTA
AGCACAGTGC TGATGCGGCG GGCCAGGGAA TACCAGCAAA GCGGGGACCT GGTAAAGGCT
ATGGAAATGG CCTTTGCGAT ACTGGTTACC GTTGAACCGG AAAAGGACCC TGAAGACCTG
GTTTACTACG CCATAGTAAT GGATGTAGTT GGCTTTATCA CCGAACTGGA AAAAGATTAC
TGA
 
Protein sequence
MNILPYIAAL EKVLAELPEK GHLLTLREYA LDDRILLHKM IFRFLDFSYA ETVYLLKGLI 
IYQQRWGDLN EIAKEGIREV STVLMRRARE YQQSGDLVKA MEMAFAILVT VEPEKDPEDL
VYYAIVMDVV GFITELEKDY