| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1989 |
|---|
| Symbol | |
|---|
| ID | 8253093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 2295932 |
|---|
| End bp | 2296324 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644935639 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003092258 |
|---|
| Protein GI | 255531886 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0950788 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00000877575 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATACAT CCAACATTAA CAACTTATTA GAAAAATACC TTGATGGTAT TTCAACGCCT
GAAGAAAATG CGATGTTGGA AACATGGTAT ATGCGTTATG AAAATAAGAA CCTGGTGCAG
GTTGCAGATG AACTGCGAAT TGACCAGCTA GAAAGGATAA GGATGCAGAT GGCTCAACAT
AGTACACGAG CAAAAACTAT TAAACTTTGG TCTCGTATCA TCGGCGTAGC CGCTGCGGTA
GCAGCCATTG TGTTTGGGGT ATTCTTTTTT AAAGCGCCAG GTAATCCTGA ACCTGGGTTA
GGAGCTACAA ACTATACTAA CGACATTGCC CCGGGTAAAA ACACCGCAAC CCTTACCCTT
GCCAATGGTA AAACCATTCC TAAGCGATGT TAA
|
|---|
| Protein sequence | MNTSNINNLL EKYLDGISTP EENAMLETWY MRYENKNLVQ VADELRIDQL ERIRMQMAQH
STRAKTIKLW SRIIGVAAAV AAIVFGVFFF KAPGNPEPGL GATNYTNDIA PGKNTATLTL
ANGKTIPKRC
|
|---|
| |