Gene Phep_1970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1970 
Symbol 
ID8253074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2274059 
End bp2275438 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content34% 
IMG OID644935621 
Producthypothetical protein 
Protein accessionYP_003092240 
Protein GI255531868 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.1118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000245675 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGGTAT TGGGATATTT TTCGCTACTT ATCGTTCTTC CATTGATTGT ATTTTCTTCT 
TGCAAAAAGA CAGAAATTCT TGCAGAACCT GTTCAACCGG AGATTATTAA AGAAACTCCA
GTACCTGAAA ACAAACCGGA AACAAGCAAA CCACCGGTAT TTGAACGCAT TTTGGATGTT
GGTACAGGAT CAGGAAACCT TATAATTGAC GGTTTAACCA CACCATTTAA GTGTAAAGAT
TTAATCAGAA TTAAAGGAGG GACTTATAAA GGTATTGTTA TACGAAATAT TATTTCAGAT
AACGGATGTC CAATTACCAT ACAAAATGAT GGATTGGTTG AAATCACCGG AAATTTCAAT
AAAATGGATC TTAGCAACCT GAAAAACGTT GTTATTTCAG GAGATGGTAC GCCTGGCATT
GCTAAAGGTT TCTCCTTTAG TGATAATACC TATAGAGCCA TTGAAATGAG TGGAAGTGTG
GATAATTTTA CCCTACAAAA TATTTCATTT AAAAATATTG GGAATTATGT GATCAATTAT
CCAGAAAACA AGGCCTATAA TGGAACTGAA GATTCATACA TGAAAAACTT AAAGTTTTTG
AACATCAATT GTGACAATTG CAATGTTTTT TTAAATGCTC ATGGTTCGGT GCAAAATGGT
AATATCACGG GATTAATTAA AAATATTGAA ATCGGATATC TGGACTTTCA AAATTCACCA
AATGTTGGTA CTGTTGTATA TATAGGTAAT GTAGAAGATT ACAATATCCA CCACAATAAG
ATTAACAATA TCAATACCCA AAACAACAAT CACAATGGGA TTTTCCAATT AAATGGCAAT
GGAAAATTTT ATAACAATTA CATCAGTAAT CATCAGGGAA ATGCACTTAG GGCTTGGGGA
CATACTATTG GATCTACCCC TAAAGATATT CTAATTTACA ATAACATTGT GGTAAATTCC
AGAAAATACT CCGGCTTTGA AGTTCAGGCT TTTTCTTACA ATATAGTTGG TGGCAAAACG
ACTTTTACAA ATGCAAAGAT TTTTAACAAC ACTTGTGGAA ATCTGAATAC AAGTAAAGAT
TGGTATGGAA GTGTGGTAGA TGTATATAGC TTATTTGGCG GAACCTGTGA CGTTTACAAT
AATTTAGGTT ATAATTTTCA GCCTGGTAGC GGAATTTCAA ACCAGCAGGC AGATTTAAAA
CCGAACACAT ACAGTAATTT ATATTTTTCT ACAAGTGCTG AAGCCGGACT GGTGGATCAG
AGCACTTTTA AACTAGCAAA TGGCTCTCCT GCAAAAAACT CTGGAAAGCA AACCCCAATT
GAAATAGATT ACTATGGAAA TATAAGAGGA ATCTCACCTT CTATCGGAGC TGTAGAATAG
 
Protein sequence
MKVLGYFSLL IVLPLIVFSS CKKTEILAEP VQPEIIKETP VPENKPETSK PPVFERILDV 
GTGSGNLIID GLTTPFKCKD LIRIKGGTYK GIVIRNIISD NGCPITIQND GLVEITGNFN
KMDLSNLKNV VISGDGTPGI AKGFSFSDNT YRAIEMSGSV DNFTLQNISF KNIGNYVINY
PENKAYNGTE DSYMKNLKFL NINCDNCNVF LNAHGSVQNG NITGLIKNIE IGYLDFQNSP
NVGTVVYIGN VEDYNIHHNK INNINTQNNN HNGIFQLNGN GKFYNNYISN HQGNALRAWG
HTIGSTPKDI LIYNNIVVNS RKYSGFEVQA FSYNIVGGKT TFTNAKIFNN TCGNLNTSKD
WYGSVVDVYS LFGGTCDVYN NLGYNFQPGS GISNQQADLK PNTYSNLYFS TSAEAGLVDQ
STFKLANGSP AKNSGKQTPI EIDYYGNIRG ISPSIGAVE