| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1968 |
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| Symbol | |
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| ID | 8253072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2271656 |
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| End bp | 2273089 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 644935619 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_003092238 |
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| Protein GI | 255531866 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.901691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000136517 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAATC AGGCCGTTGC CATTAATGGT GCTAAGTGGA CTACTACAGC AACTGTAATT
AATACTTTGC TTTCTTTTTG CCAACTAGCG ATAGTGGCAA GGGTTTTAGA ACCTACTATA
TTTGGATTGG TTAGCATCTG TACACTTGTT TTAAACTTTT TCCACATATT CGCTAATTTA
GGATTCACGA ATTCTATCAT CTCCAAACAG GAGAATGATA AAAAAATCTT ATCTACCATA
TTCTTTGCAA GCATTGCCCT TGGCTTTACA ATGGGTGCAC TAATTTATTT GTCATCAGGA
TTTGTTGTTG ATTATTACGA TGAGCCTAAA CTATCTCATG TAATAAAGGT TTCTGCAATT
ACCTTTCCAA TGATCTATAC AAGCCAGATT TACTGGAATC TACTTCAAAA GGAACTCAAG
TTTAAAATCC TTGCGGTTAT TGAGGTTATT GGAGCAGTAT TAAATATCGT ACTAACTGTT
ACCCTCGCTT ATAGTGGTTT TGAAGAACGA TCAATTATAT ATAGTCAGGT TATTTTTACT
GGGGTTAAAA CATTTCTTTA TATCCTATTG GGAAAGAATC TATTTACCCC CGTCTGGTAT
TTTAAACTGG GCGAAATAAA GGATCACCTC AGGTTTGGAA TATACCATAT GGCCGAAGGA
GTTCTTGGTT TTGTGAATGG AAATTTAGAA AACATCGTGA TAGGTAAGGC GGTAGGTATT
AAAGAATTGG GTTTATATAC AATTGCTTAC CAGTTAGCGG TTTTCCCAAT CACCAGATTA
AACCCCATAA TTATGCAGGT CTCCTATCCA ATTATGGCAA AGATGAAAGA TATTGATGGC
TTAAAAAGGG CATATTTAAA AATTGTTGAT TTCATTTCTT TTTGCAATTA TCCTTTGTTA
TCCGGATTAT TCATTACTTC ATCCAGCGTA GTTGTTTTGA TATATGGGGC GGATTATGAA
GGTTCAGTGC AATTGGTTAA AATTATAGTA TTTGTCAGTT TTCTGGCTTG TGTAATTGCT
CCTGCATCAT CTGTAGCACT ATCCAGAAAT AAACCCAACC TGATGTTTTA TGTAAACCTA
ATCTCTCTTA TTGTAAAAAT ACCTACTTTA TATTTCTTTT CTCAAGCATT TGGTTTAATC
GGAATAGCGT ACGGATATGT AATCACGTCT TTATTAGAAA CAATAATTGT ATTTTATATA
GTTAACCATT TGGTAGGCAG CTTCCTTAAA AAGTTAGTAA GTAATATTCT TATGCCCATT
TCTTTCTGTT TAATAATGGT TGGGCTGATC TTTCTTTATC AACGTTTTAT TGGCAACACG
GGTTTGATTC ATCTTATTGC TCAGGTAATT ATTGGTGGAG CTGTTTACAT TGGCCTGACG
TTAAAATATA AGCTATCATT AAGCGAGATG CTGGCATTAA AAAAATCTTT ATAA
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| Protein sequence | MSNQAVAING AKWTTTATVI NTLLSFCQLA IVARVLEPTI FGLVSICTLV LNFFHIFANL
GFTNSIISKQ ENDKKILSTI FFASIALGFT MGALIYLSSG FVVDYYDEPK LSHVIKVSAI
TFPMIYTSQI YWNLLQKELK FKILAVIEVI GAVLNIVLTV TLAYSGFEER SIIYSQVIFT
GVKTFLYILL GKNLFTPVWY FKLGEIKDHL RFGIYHMAEG VLGFVNGNLE NIVIGKAVGI
KELGLYTIAY QLAVFPITRL NPIIMQVSYP IMAKMKDIDG LKRAYLKIVD FISFCNYPLL
SGLFITSSSV VVLIYGADYE GSVQLVKIIV FVSFLACVIA PASSVALSRN KPNLMFYVNL
ISLIVKIPTL YFFSQAFGLI GIAYGYVITS LLETIIVFYI VNHLVGSFLK KLVSNILMPI
SFCLIMVGLI FLYQRFIGNT GLIHLIAQVI IGGAVYIGLT LKYKLSLSEM LALKKSL
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