| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1965 |
|---|
| Symbol | |
|---|
| ID | 8253069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 2268350 |
|---|
| End bp | 2269210 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644935616 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_003092235 |
|---|
| Protein GI | 255531863 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0000341692 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTTT TTAAAAATCC TAAGTGGTTA AGAGATTTTG ATTTTCCATT CAACAAATTT
GAAGAGATAC CTCAGAGTAC CTTTGACGAA ATTAATAAAA AGCTCGATAA GATCATCGGT
GACGAACCAT TGGTTACTAT TTTAATAGCT GCCTGGAATG AAGAAATTAA CATTTTAAGG
TGTATTGCTA GTCTTTCTGA AACAAAATTT GACTTCCCCA TTGAAATTAT TGTGGTAAAT
AATAATTCAA AAGACAGAAC ACAGGATACA ATTTCTAAAC TGCATATTAA AAGTATGTTT
GAAAAAGTAC AAGGATGTGG ACCCGCCAGG CAACTTGGAC AATTAAATGC AAAAGGCAAA
TTTGTACTAC TTGCCGATGC TGATTGTTTT TACCCTTCAT GTTGGGTTAA TGATATGTTA
GCAGTGTTGA AAAAGAAAGA TGTGGTATGT GTGTACGGCA GATATTCTTT TATAAGTAGT
CCTGGTTTTC CTAGATGGAA ACTTTATATG CTTGAGAAAA TGAAAGATAT CATTTCAGAA
TTCAGACAGC TTAACAGACC TTATTTTAAT GCGTATGGAA TTAGCATGGG CTATATAAAA
GAACTAGGTC TGAAAGTGGG ATTTATAAAT GATAATTTTT GGGGCGATGA CGGGCAGCTG
TGTTTGGGGT TAATGAAATA TGGTAAGATC CGGCAGGTAA GATCTAACAG AGCTCGGGCA
TGGACCGGAA CAAGAACGCT AGAACGAGAT GGCAATGATT TTACGAAAGC CCTAATGTCA
AGAATCAACA AAGAGCTAAA AAGATTTTTT AGCAATTTCA ATTCTAAGCT TCCAGAAGAT
TCTTATAAGA AAACTTCTTA A
|
|---|
| Protein sequence | MKLFKNPKWL RDFDFPFNKF EEIPQSTFDE INKKLDKIIG DEPLVTILIA AWNEEINILR
CIASLSETKF DFPIEIIVVN NNSKDRTQDT ISKLHIKSMF EKVQGCGPAR QLGQLNAKGK
FVLLADADCF YPSCWVNDML AVLKKKDVVC VYGRYSFISS PGFPRWKLYM LEKMKDIISE
FRQLNRPYFN AYGISMGYIK ELGLKVGFIN DNFWGDDGQL CLGLMKYGKI RQVRSNRARA
WTGTRTLERD GNDFTKALMS RINKELKRFF SNFNSKLPED SYKKTS
|
|---|
| |