| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1946 |
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| Symbol | |
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| ID | 8253050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2247191 |
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| End bp | 2248039 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644935597 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_003092216 |
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| Protein GI | 255531844 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00148906 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCCAAC CAACAGCTCC GCTCAATTTA CAAACGATAA GCATATTAGG TTGCGGCTGG
TACGGAATCG AGTTGGCAAG GGAACTTGTT GCAAAAGGTT ATACCGTAAA AGGATCCAGC
ACCACTGTAC AAAAACTTCA GCTACTTGCT GAACAACAGA TACAACCTTT CCTGGTCAAT
TTTGAAAAAG ATAAAGAAAG CTACGATCCC CTGTTCTTTA AGACAGAGCT ATTGTTTGTA
TGCATTCCCC CAAAACGAAG TGAAGGTCAG CAATCTGATT ATCTACATAA AATTCAGCGG
ATCTGTACCG CGGCCCAACT TCATAAAATA TCAAATCTGA TATTTATAAG TTCAACAGCT
GTGTATGGCG ATCACAATGA AGAGGTAACA GAATTAACTG TCCCCAATCC TGAAACCGCT
TCAGGTAAAG CCATTCTGGA CGCCGAAAAC CTTTTAAGCA CACACCCCGG TTTCAATTGT
ACTATCCTTC GTTTTGGGGG CCTTGTTGGC CCTGGCCGAC ATCCGGGACG TTTCTTTGCC
GGAAAAACAG ATATACCCAA TGGCCTTGCC CCTGTAAATC TCATCCATTT AACCGACTGT
ATAGGCATTA GTATACACCT TGTTCAACAT GAAATAACTA ACATCATTAT CAATGCATGT
TCACCAGACC ATCCTGCAAA GCAGGATTTC TATGTGGCAG CAGCTCTAAA TGCCAAACTT
CCTCCTCCGG TATTTAAAAA TGAACTGCTG AAATGGAAAT TAATCACAGG TATTCAGGCA
CCTTTATTAA ATTATACTTA TCAGGTATCA AACTGGGCAA GCTGGTTTCA GCAAAACAAC
AACCTATAA
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| Protein sequence | MGQPTAPLNL QTISILGCGW YGIELARELV AKGYTVKGSS TTVQKLQLLA EQQIQPFLVN
FEKDKESYDP LFFKTELLFV CIPPKRSEGQ QSDYLHKIQR ICTAAQLHKI SNLIFISSTA
VYGDHNEEVT ELTVPNPETA SGKAILDAEN LLSTHPGFNC TILRFGGLVG PGRHPGRFFA
GKTDIPNGLA PVNLIHLTDC IGISIHLVQH EITNIIINAC SPDHPAKQDF YVAAALNAKL
PPPVFKNELL KWKLITGIQA PLLNYTYQVS NWASWFQQNN NL
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