Gene Phep_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1943 
Symbol 
ID8253047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2243134 
End bp2244132 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content38% 
IMG OID644935594 
ProductIntegral membrane protein TerC 
Protein accessionYP_003092213 
Protein GI255531841 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0861] Membrane protein TerC, possibly involved in tellurium resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00153344 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATAATA TGATTAATCA TCCCGGTGTT ATTATTGGGT TTGCAGTTGT GGTAGTAGTA 
ATGCTGCTAT TGGATCTGGG TGTTTTTAAT AAGAAGGTGC ATGCAGTGAG CAGCAAGGAA
GCAGCAATAT GGTCTGTGGT CTGGATCAGC TTGTCCATGG CATTTAGTGG GGTAATTTAC
CTAACCTCGG GTTTTGAGAA GTTTACGCAG TTCCAGTCGG CCTACTGGAT AGAGAAGGCC
CTGTCGGTTG ACAACCTTTT TGTATTTATA CTGGTGTTTG GATTTTTTAA TGTGCCTAAG
GAATTACACC ATAAGGTATT GTTTTGGGGA ATTATTGGCG CTTTACTGTT CCGTGCAATT
TTCATTTTTG CAGGCGTAGG GTTGATTAAC CTTACTTATT TGCCTGAGAT GACTGTATTT
GGACAGTTGG TAAAGATCAA TATTGTGCTG TTGATTTTCG GGCTGTTCCT GATCTATGCA
GGCATTAAAT CCTGGTTTGC TGGTGAAGAC GAGGACGAAG AAAAAGACTT TAGTAAAAGT
CCGGGAGCAA GAGTAATTTA TAAGTTTTTT AAAGTAAGCA AAGAGTTTGA TGGTGCCAAA
TTTTTTACGG TAGAGAATGG AATTAAACTG GCTACACCTT TACTGGTAGT AGTAGCCGTA
ATTGAATTTA CAGATTTACT GTTTGCTGTA GACTCTATTC CTGCCATTTT TGCAATTGCC
CCAGATGATC CTTTGATTCT TTATACTTCA AATATATTTG CAATATTGGG GCTAAGGGCA
CTTTATTTCC TGCTGGCCAA CTTTATTCAT ATGTTTAGCC TGTTAAAATA TGGCCTGGCA
ATTATATTGG CATTTATTGG TGTTAAAATG GTTATTGCAC CATTTTACCA TATATCTTCA
CCCTTATCAT TATCTATTGT GGGTGGGGTA TTAATTTTAT CGGTTATTGC TTCGCTGATA
TTTGTACCTA AAGAAAGCCA GGAAATTAAA CAGGATTAA
 
Protein sequence
MDNMINHPGV IIGFAVVVVV MLLLDLGVFN KKVHAVSSKE AAIWSVVWIS LSMAFSGVIY 
LTSGFEKFTQ FQSAYWIEKA LSVDNLFVFI LVFGFFNVPK ELHHKVLFWG IIGALLFRAI
FIFAGVGLIN LTYLPEMTVF GQLVKINIVL LIFGLFLIYA GIKSWFAGED EDEEKDFSKS
PGARVIYKFF KVSKEFDGAK FFTVENGIKL ATPLLVVVAV IEFTDLLFAV DSIPAIFAIA
PDDPLILYTS NIFAILGLRA LYFLLANFIH MFSLLKYGLA IILAFIGVKM VIAPFYHISS
PLSLSIVGGV LILSVIASLI FVPKESQEIK QD