Gene Phep_1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1913 
Symbol 
ID8253017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2209594 
End bp2209944 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content42% 
IMG OID644935564 
Producthypothetical protein 
Protein accessionYP_003092183 
Protein GI255531811 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.915766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT TTGTGTACGT GGTAACAGAC AGGAACAGGA CCAGTTTACA TGTTGGGATG 
AGTTCCGATC TAATTAAGAC ATTAGATTTC TACAAACAAA TGCCTTGTTT ATTGTTTGAC
AGCGGGCAGC AGCTCACGCG ATTGGTTTAC TTTGAAGAGT TAAAGACAGA GGCCCAGGCG
TTGAGCCGCT TTAAGCTGAT CAGCAGGTTT ACACGAACAC AAAAAGAAAG GCTGGTACGT
TCCTGTAACC CAGACTGGAT AGATCTTACT ATAGGATTGG ATTTTGAGCA CATTACGACC
AACAAGAAGA TGGTCAATCA GGTAAACCTG TCGTTCAGTA TACTTTCTTA G
 
Protein sequence
MKKFVYVVTD RNRTSLHVGM SSDLIKTLDF YKQMPCLLFD SGQQLTRLVY FEELKTEAQA 
LSRFKLISRF TRTQKERLVR SCNPDWIDLT IGLDFEHITT NKKMVNQVNL SFSILS