| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1912 |
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| Symbol | |
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| ID | 8253016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2208686 |
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| End bp | 2209462 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644935563 |
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| Product | helix-turn-helix domain protein |
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| Protein accession | YP_003092182 |
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| Protein GI | 255531810 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.978099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAAATA TTTCAAGCAA CCTGAAGTAC TTAAGAAAGA AAAAAGGCCA TACACAACAG
CAATTCGCTG ATGCTATGCA AATTAAGCGA TCTCTTATTG GGGCATACGA GGAAGACCGG
GCTGAACCCA AATATGATTT GCTAAAAAAA ATAGCAGAAT ATTTCGACCT GACAATAGAT
GAGTTTATCA ACGAAAATAT CAATGACGAC TGGAAACCCA AGCCAAAAAG CCAGGGATCT
AACTTGCGGA TATTAAGTAT ATCGGTAGAC AAAGATGACA ACGAGAATAT AGAAATGGTT
CCCGTAAAGG CAAGTGCCGG CTATCTCAAC GGATTTGCAG ACCCTCAATA CATCAAAGAA
CTACCCAGAT TTCAGCTTCC ACTCCCCTTT TTAAAACATG GTACCTTCAG GGCCTTCGAA
ATTGTAGGCG ATTCTATGCT GCCCATACAG CCTGGAAGTG TGATCGTTGC AGAATATATG
GACAACTGGA ACGACGTTAA AACAGGTGAA ACCTATATCA TTGTAAGCAG AACGGAAGGT
GTCGTTTACA AAAGGGCAGG AAACCGTTTT AAAGAAAATA AAGAGCTTAA GCTAATCTCA
GACAATAAGA TCTACGATCC CTATACCGTT GCTGCAGATG ACATCATGGA AATCTGGAAG
GCAAAGGCAT ACATTTCAAC TTCTTTGCCT GAACCAACCC CGGAACCTAC TATAGAAACC
TTGAGTGCCA TGATGGCCCA AATGCAAAAA TCCATCTCCC AGCTAAACAA AAACTAA
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| Protein sequence | MSNISSNLKY LRKKKGHTQQ QFADAMQIKR SLIGAYEEDR AEPKYDLLKK IAEYFDLTID
EFINENINDD WKPKPKSQGS NLRILSISVD KDDNENIEMV PVKASAGYLN GFADPQYIKE
LPRFQLPLPF LKHGTFRAFE IVGDSMLPIQ PGSVIVAEYM DNWNDVKTGE TYIIVSRTEG
VVYKRAGNRF KENKELKLIS DNKIYDPYTV AADDIMEIWK AKAYISTSLP EPTPEPTIET
LSAMMAQMQK SISQLNKN
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