Gene Phep_1905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1905 
Symbol 
ID8253009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2202911 
End bp2203648 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content43% 
IMG OID644935556 
Productprotein of unknown function DUF224 cysteine-rich region domain protein 
Protein accessionYP_003092175 
Protein GI255531803 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAG AATTATTTAT ACCCTGTTTT GTTGACCAAT TGTATCCTGA AACTGCATTT 
AATACCGTTA AATTGCTGGA GAAGGCAGGA TGCCAGGTGT TTTATAATTC TGAACAGACC
TGTTGCGGAC AGCCTGCCTA TAATGCCGGT TACTGGGAAC AGGCCAAGGA AACGGGGATC
AAGTTTTTAA ACGATTTTTC GGAAACAGAT TATATTGTAG CCCCATCGGC CTCTTGTGTG
GGGATGGTGA AAAATGGCTT TAACGACTTG TTTACCAATA CCATTGTACA TAACAAGTGC
AGGAGTATAC AGAGTAATAT ATTTGAGCTT TCCGATTTTC TGGTGAACGT ACTGAAGAAG
GATTATTTTG GTGCAGAACT GGATGGAAAA GCGGTGTACC ATGATTCCTG CAGCGGACTG
CGGGAATGTA AAATTAAAGA GGAGCCCAGG CTGCTGCTGT CTAAAGTGCA TGGCCTGGAG
ATGGTGGAAA TGAAAGACAC GGATATGTGC TGCGGATTTG GTGGGACCTT TGCGGTTAAA
TTTGATTCCA TATCCTCGGC CATGGCCCAG CAAAAGGTAA ACAATGCCCT GGAACAGGGT
GCGGAATTCA TCATTTCGAC AGATCTGTCC TGTCTGATGC ACCTGCAGGG ATACATTGAT
AAAAACAATA TTCCGCTTAA AACCATGCAT TTAGCCGATG TACTGACAAA TGGCTGGCTG
GAAAGTACAG AATATTGA
 
Protein sequence
MKIELFIPCF VDQLYPETAF NTVKLLEKAG CQVFYNSEQT CCGQPAYNAG YWEQAKETGI 
KFLNDFSETD YIVAPSASCV GMVKNGFNDL FTNTIVHNKC RSIQSNIFEL SDFLVNVLKK
DYFGAELDGK AVYHDSCSGL RECKIKEEPR LLLSKVHGLE MVEMKDTDMC CGFGGTFAVK
FDSISSAMAQ QKVNNALEQG AEFIISTDLS CLMHLQGYID KNNIPLKTMH LADVLTNGWL
ESTEY