| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1898 |
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| Symbol | |
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| ID | 8253002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2191622 |
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| End bp | 2192761 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644935549 |
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| Product | phosphoribosylaminoimidazole carboxylase, ATPase subunit |
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| Protein accession | YP_003092168 |
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| Protein GI | 255531796 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
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| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.255971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAAAC AAATAAGTGA TCTGAAATTG GGAATATTGG GCGGCGGACA ACTCGGCAGA
ATGCTGATCC AGGAAGCCAT CAATTATAAC CTTACGACCC TGGTTTTAGA TCCGGATACC
GATGCTCCCT GTAAACATCT TGCAAATTAC TTTGAATGTG GCTCTATTAC CGATTTTGAC
ACCGTTTACA ACTTCGGCAA AAAAGCAGAT ATCATTACCA TAGAAATAGA AAAGGTAAAT
ATTGAAGCAT TGGAACAACT GGAAAAGGAA GGAAAACAGG TTTTCCCGCA ATCCCGGGTA
ATCCGCCTGA TCCAGGACAA GGGTGTTCAA AAACAGTTTT TTAAAGAAAA CAACATCCCA
ACAGCACCTT TTCAGCTGGT AAATACCAGA GAAGAGATGC GCCACAGCAG GTTTGCGTTT
CCTTATATAC TTAAACAGCG CCGGGATGGC TACGACGGTA AAGGCGTGAT GAAAATAAAC
CATGCAGCTG ATATTGAGCA GGCCTTTGAT GCGCCCTGCC TGATTGAGGA AATGATAGAC
TTTGAAAAAG AGATTGCCGT TATTGTGGCC AGAAACGCTA ATGGGGACAT GAAAACTTTT
CCGATGGTAG AAATGGAATT CAATGCCGAG GCCAATCTGG TCGAGTTCCT GATCTCTCCT
TCTACTTATC CTGAAGCGCT TCAGAACAAG GCCGAGGTAA TTGCCAAAAA CATCGCTTCC
TCCCTTAACA TCACCGGCTT ACTGGCCGTA GAAATGTTTG TGACCAGGAA TGGGGAGCTG
CTGGTCAATG AGCTGGCACC AAGACCACAC AATAGCGGAC ATCAAACCAT TGAGGGCAAT
TATGTTTCTC AGTTTGACCA GCATTTAAGG GCAATTTTTA ACCTGCCATT GGGCGATACA
CGCAGCATCA GCAATGCAGT GATGATTAAT CTGCTGGGCG AGAAAAACCA TAATGGGGTA
GCCAAATATC AGGGATTGGA AAAAACCATG GCCATTGATG GGGTATATAT CCATCTTTAC
GGTAAAAAAT ACACCAAACC TTTCCGCAAA ATGGGCCATG TTACGGTGGT AGACCAAAAC
CGGGAAAGTG CAGTACAGAA AGCAAATTAT ATTAAAAATA CATTAAAAGT TATTTCATAA
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| Protein sequence | MAKQISDLKL GILGGGQLGR MLIQEAINYN LTTLVLDPDT DAPCKHLANY FECGSITDFD
TVYNFGKKAD IITIEIEKVN IEALEQLEKE GKQVFPQSRV IRLIQDKGVQ KQFFKENNIP
TAPFQLVNTR EEMRHSRFAF PYILKQRRDG YDGKGVMKIN HAADIEQAFD APCLIEEMID
FEKEIAVIVA RNANGDMKTF PMVEMEFNAE ANLVEFLISP STYPEALQNK AEVIAKNIAS
SLNITGLLAV EMFVTRNGEL LVNELAPRPH NSGHQTIEGN YVSQFDQHLR AIFNLPLGDT
RSISNAVMIN LLGEKNHNGV AKYQGLEKTM AIDGVYIHLY GKKYTKPFRK MGHVTVVDQN
RESAVQKANY IKNTLKVIS
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