| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1895 |
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| Symbol | |
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| ID | 8252999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2189850 |
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| End bp | 2190503 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644935546 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_003092165 |
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| Protein GI | 255531793 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.85169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGGACC ACAATAAAAA TAATTTGCAT GATTTAAGAC AGGAATACCG CGCCGCACAA
CTTACAGAAC AAGATGTAGA GAGCGACCCT ATCCTGCAGT TTGGAAAATG GTTTAATGCT
GCTGTAGATG CACAATTGTA CGAACCCAAT GTAATGACCC TGGCCACATC CGACCGGTTT
GGCAAGCCTT CGGCAAGGAT TGTACTACTA AAGGGCTTTG ATGAAAATGG TTTCGTCTTT
TACACCAATT ACGAGAGTAA AAAAGGAAGG GACCTGATAG AGAACCCACA GGCCGCACTG
GTGTTTTTCT GGGCCGAACT GGAACGTCAG GTACGTATTG AGGGGGTAGT GAGTAAAGTT
GATGCCGAAA CATCTGCCGC TTATTTCCAT TCCCGTCCTG CAGGCAGCCA GATCGGTGCC
CTGGCCTCGC CGCAAAGCAA GGTACTGGAC AACAGGGAGT CACTTGAACA AAAGGTGGCC
GCACTGACTA AAGAATTTGA GGGCCGTGAA ATTCCCCGTC CGCTACACTG GGGTGGCTAC
CTCATAGAAC CTTCGCATCT CGAGTTCTGG CAGGGCCGTC CCAGCAGGCT GCACGACAGA
ATTGCTTACG ATTTAGTGGA TGGTTCGTGG ATTATAAATA GATTAGCGCC TTAA
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| Protein sequence | MMDHNKNNLH DLRQEYRAAQ LTEQDVESDP ILQFGKWFNA AVDAQLYEPN VMTLATSDRF
GKPSARIVLL KGFDENGFVF YTNYESKKGR DLIENPQAAL VFFWAELERQ VRIEGVVSKV
DAETSAAYFH SRPAGSQIGA LASPQSKVLD NRESLEQKVA ALTKEFEGRE IPRPLHWGGY
LIEPSHLEFW QGRPSRLHDR IAYDLVDGSW IINRLAP
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