| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1893 |
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| Symbol | ruvB |
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| ID | 8252997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2187866 |
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| End bp | 2188888 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644935544 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_003092163 |
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| Protein GI | 255531791 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAA ATCTTGATCC ATCATCCGAA AGCCTTTCAC CTGTAGAACG CGATATTGAA
AAAGTACTGC GCCCACAGGC TTTTGATGAT TTTACGGGAC AGGAAAAGGT GATGGAAAAC
CTGAAGATCT TTGTGAAAGC GGCCAAGCTA CGTGGCGAAC CGCTGGATCA TGTCTTGTTA
CATGGCCCCC CCGGACTGGG TAAAACCACA CTTTCCCTTA TCATTGCCAA TGAAATGGGC
GTGGGCATAA AGGTGACCTC CGGACCGGTT CTGGATAAAC CCGGGGATCT GGCAGGGCTG
CTGACTGGTC TGGATGAGGG CGATATCCTT TTTATTGATG AGATACACAG GTTAAGCCCC
CTGGTTGAAG AGTACCTGTA CTCGGCCATG GAAGATTTTA AGATAGACAT TATGCTCGAG
AGCGGTCCGA ATGCACGCTC TGTACAAATC TCATTGAACC CTTTTACCCT GGTTGGTGCC
ACTACCCGCT CCGGCCTGTT AACTGCCCCC TTAAGGGCAA GGTTTGGCAT CAATTCCAGA
CTGGCCTACT ACGATGCCAA GCTACTGACC ACCATTGTAC TGAGGTCATC AGAAATTCTG
AAAACCCCGA TTACAGATGA AGGGGCCTAC GAAATTGCCA GAAGGAGCCG TGGAACACCA
CGTATTGCCA ATGCTTTATT AAGGCGTACC AGAGATTTTG CGCAGATCAA AGGTACCGGA
GAAATAGATA CAGAGATTGC CCGTTATGCT TTAAAAGCAC TAAATGTGGA TGAACACGGA
CTGGATGAAA TGGACAATAA AATACTGACC ACCATTATCG ACAAGTTTAA AGGTGGTCCG
GTAGGTTTAA AAACCATAGC TACCGCTGTT GGTGAAGATG AGGGTACCAT TGAAGAGGTT
TATGAGCCTT TCCTGATCCA GGAAGGTTTT TTAATGCGCA CTTCAAGAGG CCGGGAAGCC
ACTGAGGCAG CTTATAAACA CCTGCAAAGA AATTTCCCCG GGCAAACCGG AAGATTATTC
TGA
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| Protein sequence | MNENLDPSSE SLSPVERDIE KVLRPQAFDD FTGQEKVMEN LKIFVKAAKL RGEPLDHVLL
HGPPGLGKTT LSLIIANEMG VGIKVTSGPV LDKPGDLAGL LTGLDEGDIL FIDEIHRLSP
LVEEYLYSAM EDFKIDIMLE SGPNARSVQI SLNPFTLVGA TTRSGLLTAP LRARFGINSR
LAYYDAKLLT TIVLRSSEIL KTPITDEGAY EIARRSRGTP RIANALLRRT RDFAQIKGTG
EIDTEIARYA LKALNVDEHG LDEMDNKILT TIIDKFKGGP VGLKTIATAV GEDEGTIEEV
YEPFLIQEGF LMRTSRGREA TEAAYKHLQR NFPGQTGRLF
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