Gene Phep_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1890 
Symbol 
ID8252994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2185059 
End bp2185997 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content45% 
IMG OID644935541 
Productiron-sulfur cluster binding protein 
Protein accessionYP_003092160 
Protein GI255531788 
COG category[C] Energy production and conversion 
COG ID[COG1600] Uncharacterized Fe-S protein 
TIGRFAM ID[TIGR00276] iron-sulfur cluster binding protein, putative 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAACA ATGCTTCCAG ATACAGCAAG CTGATTAAAG CCGAGGCCCT TAGGCTTGGC 
TTTATGCAAT GCGGTATTGC CAAAGCAGAT TTCCTGGAAG AGGAAGCGCC AAAACTGGAG
AAATGGCTGC ACAACAACCA TCACGGACAG ATGGCTTACA TGGAAAATCA TTTCGACAAA
AGGCTGGATC CCAGATTGCT TGTGGAAGAT TCCAGATCTG TCATTTCTTT GACCCTCAAT
TATTTTCCTG CTGAACAGCA GCAAGATCCC GATGCCCCAA AGATCTCTAA ATATGCTTAT
GGCATGGACT ATCACCAGGT GATCAAGGAT AAGTTGTACC AGCTGCTGAA CTTTATAAGG
GAAGAAATTG GCGAGGTTGC CGGCAGGGCA TTTGTAGATT CGGCGCCGGT GCTGGACAGG
GCCTGGGCAA AACGTGCAGG CATTGGCTGG ATTGGCAAAA ACAGCAACCT CATCAATAAG
AAGAGTGGTT CCTTCTTTTT TTTAGCTGAA CTGATTGTAG ACCTGGAGCT GGAGTATGAC
CAGCCCTTTA CGGCAGACCA TTGTGGCACC TGTACCAAGT GCATAGATGC CTGTCCTACT
GATGCCATTT TATCACCCTT TATCATCGAC GCCAAAAAGT GTATCTCCTA CCTCACCATT
GAACTGAAAG AAGAAATTGA CCAGGACTTT AAAGGTAAAA TGGACAACTG GATGTTTGGC
TGCGATATAT GCCAGGATGT TTGCCCCTGG AACAGGTTTT CCGCCCCGCA TTCAGAACCT
ATGTTTAAAC CAAATGAGCG CTTGCTGCAA ATGAAACGGG AAGACTGGCA GGACATTACA
GAAGATGTGT TTAAAACGAT CTTTAAAAAT TCGGCAGTAA AGCGCACCAA ATATAAAGGG
CTGACCAGGA ACATTGATTT TATAAAAAAG AGTTCTTAA
 
Protein sequence
MLNNASRYSK LIKAEALRLG FMQCGIAKAD FLEEEAPKLE KWLHNNHHGQ MAYMENHFDK 
RLDPRLLVED SRSVISLTLN YFPAEQQQDP DAPKISKYAY GMDYHQVIKD KLYQLLNFIR
EEIGEVAGRA FVDSAPVLDR AWAKRAGIGW IGKNSNLINK KSGSFFFLAE LIVDLELEYD
QPFTADHCGT CTKCIDACPT DAILSPFIID AKKCISYLTI ELKEEIDQDF KGKMDNWMFG
CDICQDVCPW NRFSAPHSEP MFKPNERLLQ MKREDWQDIT EDVFKTIFKN SAVKRTKYKG
LTRNIDFIKK SS