| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1880 |
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| Symbol | |
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| ID | 8252984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2172253 |
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| End bp | 2173446 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644935531 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_003092150 |
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| Protein GI | 255531778 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACTA CTTCAAAACT TGCATTGATC TTAGCAGATG CTGATCTTCC GGCAGCACTC
AAAGCAATTG CCCTAAAAGT TCAGAACCAG GAAAGGATTA CCTTTGATGA GGGCGTTTAC
CTGTATGAAA ATGCGGAACT GGGCTATCTG GGTGTTTTAG CCAATTACAT CAGGGAACAA
AAGCACGGCG ACAATACCTA TTTCAACCGG AATTTTCATA TAGAACCTAC GAATGTTTGC
GTGTACGATT GTAAATTCTG CTCTTACTCC CGTCTGATCA AACAGAAAGA AGAAGGTTGG
GAAATGAGTG TGGACGGTAT GATGGAGGTA TTGAAGAAAT ATGACCATGA ACCCGTAACA
GAGGTGCACA TTACCGGCGG GGTAGTGCCT AAACAGAACC TTGAATTTTA CAGCGATTTT
TTCAGAAGGG CAAAAGCACA CCGCCCGGAG CTGCACATCA AGGCATTAAC TCCTGTTGAG
TATTATTATA TCTTTAAAAA GGCGAAACTG AGCCATTATG ACGGGATGAA ATACATGCAG
GAAGCCGGTT TGGATTCCAT GCCCGGCGGT GGGGCAGAGA TCTTTCATCC GGAAGTACGG
GAAAAAATTG CACACGATAA ATGCAATGCC GAGCAATGGC TCGATATTCA CGAACAGGCG
CATAAACTGG GCATGAAAAC AAATGCTACC ATGCTTTATG GTCATATAGA GCAATTCTGG
CACAGGGTAG ACCATATGGA GCGTTTGCGC CGGCAACAGG ACAAGACCGG AGGCTTTCAG
GCTTTTATTC CGCTTAAATT CAGGAACCAG CACAACCAGA TGGACCATGT TCCGGAGGTT
TCGGTGATAG AAGATTTGCG AAATTATGCC ATTGCCCGTA TTTACATGGA TAATTTTGAC
CACATTAAAG CCTATTGGGC AATGATCAGC AGGCAAACCG CGCAGTTGTC GCTAAACTTT
GGTGTTGATG ATATAGATGG TACTTTAGAC GATACGACCA AGATCTATTC TATGGCAGGT
GCAGAGGAAC AACACCCGGC AATGAGTACC CGCGACCTGG TCGACCTCAT CAAACAGGTA
AAACGGAAAC CAATAGAAAG GGATACACTG TATAACGTAG TAACGGATTA CAGCCAGGTT
ACCTTTGAGG ATGAAGTAAA ACCACAATAT TATAAATTGC CAGTAATCAA TTAA
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| Protein sequence | MDTTSKLALI LADADLPAAL KAIALKVQNQ ERITFDEGVY LYENAELGYL GVLANYIREQ
KHGDNTYFNR NFHIEPTNVC VYDCKFCSYS RLIKQKEEGW EMSVDGMMEV LKKYDHEPVT
EVHITGGVVP KQNLEFYSDF FRRAKAHRPE LHIKALTPVE YYYIFKKAKL SHYDGMKYMQ
EAGLDSMPGG GAEIFHPEVR EKIAHDKCNA EQWLDIHEQA HKLGMKTNAT MLYGHIEQFW
HRVDHMERLR RQQDKTGGFQ AFIPLKFRNQ HNQMDHVPEV SVIEDLRNYA IARIYMDNFD
HIKAYWAMIS RQTAQLSLNF GVDDIDGTLD DTTKIYSMAG AEEQHPAMST RDLVDLIKQV
KRKPIERDTL YNVVTDYSQV TFEDEVKPQY YKLPVIN
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