Gene Phep_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1878 
Symbol 
ID8252982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2171158 
End bp2171937 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content41% 
IMG OID644935529 
ProductNIPSNAP family containing protein 
Protein accessionYP_003092148 
Protein GI255531776 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAC TTATCACTAT TTTCATTGGT ATACTCCTGC CGGTAACCCA GCTTCTTGCC 
AATGCACCTG ACAAAGATTT TTATCAGATC AGGATTTATC ATCTGAAAAA CGCGGAGCAG
GAAAAAACCG TAGATGATTT TCTAAAACTG GCTTACCTTC CTGCGCTACA TCGTGCAGGC
ATTGCTAAAG TTGGTGTTTT TAAACCCGTC CGGACAGATG ATCCCCAGGC CGAAAAACTG
ATCTATGTAT TTATTCCCTT TCGTTCCTAC CAGCAGTTTT CCAGCCTGGA AAATGTATTG
GAAAAGGACA ATAAATTGAA GGAAGACGGG AAAGCCTATC TCGATGCCTT ACATACGGCC
GCGCCTTATG AAAGGATGGA AAATATATTG TTAACTGCTT TTGAAGGACA TCGGAATCTT
AAAATGCCAA ATTTGTCTTC AGCAAAAGCA GAACGCATTT ACGAACTGCG CAGCTATGAA
AGCCCGACCG AAAAGCGCGC TAAGAACAAA ATAGAAATGT TTAATAAAGG AGATGAAATA
GGCTTATTTA AACGTCTGAA TTTCAATGCC GTTTTTTATG CTGAGGTGAT TGCAGGCAGC
CGAATGCCCA ACCTTATGTA TCTGACCACC TTTGAAAATA AAGCAGACAG GGACGAACAC
TGGAAGACCT TCGGAAAAGA TGAGCAATGG CAAAAACTAA AAAACATGCC GGAATATCAG
AACAATGTAT CCAAAAACGA CACCCGGTTC TTATATCCTG TTGATTATTC GGATATATAA
 
Protein sequence
MPKLITIFIG ILLPVTQLLA NAPDKDFYQI RIYHLKNAEQ EKTVDDFLKL AYLPALHRAG 
IAKVGVFKPV RTDDPQAEKL IYVFIPFRSY QQFSSLENVL EKDNKLKEDG KAYLDALHTA
APYERMENIL LTAFEGHRNL KMPNLSSAKA ERIYELRSYE SPTEKRAKNK IEMFNKGDEI
GLFKRLNFNA VFYAEVIAGS RMPNLMYLTT FENKADRDEH WKTFGKDEQW QKLKNMPEYQ
NNVSKNDTRF LYPVDYSDI