Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1878 |
Symbol | |
ID | 8252982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2171158 |
End bp | 2171937 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644935529 |
Product | NIPSNAP family containing protein |
Protein accession | YP_003092148 |
Protein GI | 255531776 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAAAC TTATCACTAT TTTCATTGGT ATACTCCTGC CGGTAACCCA GCTTCTTGCC AATGCACCTG ACAAAGATTT TTATCAGATC AGGATTTATC ATCTGAAAAA CGCGGAGCAG GAAAAAACCG TAGATGATTT TCTAAAACTG GCTTACCTTC CTGCGCTACA TCGTGCAGGC ATTGCTAAAG TTGGTGTTTT TAAACCCGTC CGGACAGATG ATCCCCAGGC CGAAAAACTG ATCTATGTAT TTATTCCCTT TCGTTCCTAC CAGCAGTTTT CCAGCCTGGA AAATGTATTG GAAAAGGACA ATAAATTGAA GGAAGACGGG AAAGCCTATC TCGATGCCTT ACATACGGCC GCGCCTTATG AAAGGATGGA AAATATATTG TTAACTGCTT TTGAAGGACA TCGGAATCTT AAAATGCCAA ATTTGTCTTC AGCAAAAGCA GAACGCATTT ACGAACTGCG CAGCTATGAA AGCCCGACCG AAAAGCGCGC TAAGAACAAA ATAGAAATGT TTAATAAAGG AGATGAAATA GGCTTATTTA AACGTCTGAA TTTCAATGCC GTTTTTTATG CTGAGGTGAT TGCAGGCAGC CGAATGCCCA ACCTTATGTA TCTGACCACC TTTGAAAATA AAGCAGACAG GGACGAACAC TGGAAGACCT TCGGAAAAGA TGAGCAATGG CAAAAACTAA AAAACATGCC GGAATATCAG AACAATGTAT CCAAAAACGA CACCCGGTTC TTATATCCTG TTGATTATTC GGATATATAA
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Protein sequence | MPKLITIFIG ILLPVTQLLA NAPDKDFYQI RIYHLKNAEQ EKTVDDFLKL AYLPALHRAG IAKVGVFKPV RTDDPQAEKL IYVFIPFRSY QQFSSLENVL EKDNKLKEDG KAYLDALHTA APYERMENIL LTAFEGHRNL KMPNLSSAKA ERIYELRSYE SPTEKRAKNK IEMFNKGDEI GLFKRLNFNA VFYAEVIAGS RMPNLMYLTT FENKADRDEH WKTFGKDEQW QKLKNMPEYQ NNVSKNDTRF LYPVDYSDI
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