| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1871 |
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| Symbol | |
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| ID | 8252975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2162438 |
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| End bp | 2163685 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644935522 |
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| Product | competence/damage-inducible protein CinA |
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| Protein accession | YP_003092141 |
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| Protein GI | 255531769 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1058] Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
[COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
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| TIGRFAM ID | [TIGR00177] molybdenum cofactor synthesis domain
[TIGR00199] competence/damage-inducible protein CinA C-terminal domain
[TIGR00200] competence/damage-inducible protein CinA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0858152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGCTG AAATTATAAC CATTGGTGAT GAAATACTGA TCGGGCAGAT TGTAGATACC
AATTCTGCAT GGATGGCACA GAAATTAAAC CTGATCGGTA TTAAGGTTAA ACAGATTACC
TCGGTGTCTG ATGATGCAGC ACATATTACA GAAGCGCTGA AACTTGCCGA AGGTCGGGCG
GATGTAATCC TGATTACCGG AGGTCTTGGG CCTACTAAAG ATGATGTGAC CAAAGTAACT
ATGGCAAAGT ACTTCCATAT GGGTTTTAGA AGGGACCAGG AAACTTTAGA CCATGTAACG
CATATTTTTA CGAGCCTGAA CAGACCGATG ATAGAGCTGA ACCGCCGGCA GGCTGATGTG
CCCGATGGCT GTGAGGTGAT CCAGAATAAG AATGGTACGG CACCTTGTAT GTGGTTTGAG
CAACATGGAA AAATCTATGT GTCTATGCCA GGGGTGCCAT TCGAAATGAT GTACCTGATG
ACGGAAGAGA TCCTGCCACG TTTGAAAAAC GCATTTAAAC TGCCCGCTAT TTTTCATAAA
ACCATTTTAA CGGCCGGTAT TGGCGAATCT TTCCTGGCCC AGGAAATTGA AGACATTGAA
AATGCCTTAC CTGATCACAT TAAACTGGCT TATCTGCCCA AACTTGGACA GGTACGGCTG
AGATTAAGTG GAACAGGTGC CGATGAAGCA ACGCTGCAGC AGGAAGTGAT GTTTTATGCA
CAGCAACTGA TCGGCAGGGT GAAAAAAAAT GTGGTGGCCG ACCAGGATAT TCCGCTGGAA
AAGGCACTGC TGAACATCAT GCAGGAACGG CAGCTTACCT TGAGCACTGC CGAAAGTTGT
ACTGGTGGTT ATATTTCTCA ATTGATCACG CAGCATCCTG GATGTTCTGC CGTATTTGCA
GGCGCTGCGG TTACTTATTC CAATGCATTA AAAATGTCCG TCCTTGGTGT GCTGCCTGAA
ACCCTGGAAA ATTACGGAGC GGTGAGTGAG CAAACAGTAA AAGAAATGGC CATGGGTGCG
GTTGCTAATT TCAAAACAGA TTATGCGGTC GCCGTGAGTG GAATTGCCGG CCCGGATGGA
GGTACTGAAG AGAAACCCGT TGGTACTGTG TGGATTGCAG TAGCAACCCA ATATAAGGTA
GTGGCCAGGT TGTTCAGGTT TGGCAACCGT CGTGCACAAA ATATTGAACG TGCGGCAATA
GCTGCATTAA CGATGGTTTT GAATGAGCTG AAACAAGATG TGGGTTAA
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| Protein sequence | MLAEIITIGD EILIGQIVDT NSAWMAQKLN LIGIKVKQIT SVSDDAAHIT EALKLAEGRA
DVILITGGLG PTKDDVTKVT MAKYFHMGFR RDQETLDHVT HIFTSLNRPM IELNRRQADV
PDGCEVIQNK NGTAPCMWFE QHGKIYVSMP GVPFEMMYLM TEEILPRLKN AFKLPAIFHK
TILTAGIGES FLAQEIEDIE NALPDHIKLA YLPKLGQVRL RLSGTGADEA TLQQEVMFYA
QQLIGRVKKN VVADQDIPLE KALLNIMQER QLTLSTAESC TGGYISQLIT QHPGCSAVFA
GAAVTYSNAL KMSVLGVLPE TLENYGAVSE QTVKEMAMGA VANFKTDYAV AVSGIAGPDG
GTEEKPVGTV WIAVATQYKV VARLFRFGNR RAQNIERAAI AALTMVLNEL KQDVG
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