Gene Phep_1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1862 
Symbol 
ID8252966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2152737 
End bp2153516 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content41% 
IMG OID644935513 
Productprotein of unknown function DUF62 
Protein accessionYP_003092132 
Protein GI255531760 
COG category[S] Function unknown 
COG ID[COG1912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATTA TTACATTAAC AACAGATTTA GGATCAAAAG ATTTCTACCA GGCTGCCCTT 
AAGGGTAGTA TCCTGACTAT CTTGCCTACA GCTACAATTG TTGATGTAAC CCATGAGGTG
CCATCCTTTA ATATCTCGCA CGCTGCTTTT GTATTAAAAA ACTGTTACCT ATACTTTCCT
AAAGGAACAG TCCACCTCAT TGGCATCGAT TCTGTATTCA GTGAGCACAC CAAATACATT
GCATTAAAAC ACAAAGATCA TTTTTTTGTA GGTGCCGACA ATGGGATCTT CTCTTTATTA
TTTGATGAAA AACCAGATGA AATTGTAGAG CTCAATATTA TGCAGGACCT GAAGTACCTC
CATTTTCCAC TGGTAGATAT TTTTGTAAAG GCAGCTACAC AGCTGGCCAG GGGTGCCAAA
TTAAAAGACA TAGGTGTACC TACCGAGAAC ATTGAGGAAC GGATGCTGCT TAACCCTGTT
ATCGAACGGG ACATCATCAG GGGAAGTGTA ATTTATATTG ATACCTTTAG CAATGTGATC
ACCAATATCA CCAAAGAACT GTTTACCAAG ATTCAGCGCA ACAGGGATTT CACTTTGTAT
TTTCGCAAAA GCGAAACCAT CAGTCAGCTG AGCTGGCATT ACAATGAAGT GCCCGAAGGC
GAAAAATTAT GTTTGTTCGG TATCAGTAAC CATCTTGAGA TCGCCATCAA CAAAGGAAAG
GCCAGTGGCC TGCTGGGCCT GCACCTGAAC GATATTGTCA GGGTCGAATT TCATCCTTAA
 
Protein sequence
MAIITLTTDL GSKDFYQAAL KGSILTILPT ATIVDVTHEV PSFNISHAAF VLKNCYLYFP 
KGTVHLIGID SVFSEHTKYI ALKHKDHFFV GADNGIFSLL FDEKPDEIVE LNIMQDLKYL
HFPLVDIFVK AATQLARGAK LKDIGVPTEN IEERMLLNPV IERDIIRGSV IYIDTFSNVI
TNITKELFTK IQRNRDFTLY FRKSETISQL SWHYNEVPEG EKLCLFGISN HLEIAINKGK
ASGLLGLHLN DIVRVEFHP