| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1855 |
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| Symbol | |
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| ID | 8252959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2145588 |
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| End bp | 2146262 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644935506 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_003092125 |
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| Protein GI | 255531753 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.593821 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCCATC TAATTGCCCC TTCCGTGCTT TCAGCAGATT TTGCCAACCT GCAGCGCGAT
ATTGAAATGA TCAATGCCAG TGCGGCCGAC TGGTTTCATG TGGATATAAT GGATGGTGTG
TTTGTGCCTA ACATTTCATT TGGCTTTCCG GTTATGGAAG CCATAAAACG ATACGCTGAA
AAACCATTAG ATGTGCATTT GATGATCGTA AACCCTGATC AGTACATCGA ACGGTTTGCT
GCTGCCGGTG CAGCGATGAT TACGGTGCAT TATGAGGCCT GTACCCATTT ACACAGAACT
GTGCAGGCCA TTCATGCTAC AGGCTGCAGG GCCGGGGTAG CGCTTAACCC GCATACACCT
GTCAGCATGT TGAAAGACCT GCTTACCGAT CTGGATATGG TGCTGATCAT GTCCGTAAAT
CCGGGTTTTG GCGGGCAACA GTTCATCCCA AATTCCTTAA ATAAAATTGC TGAACTGCGA
AAAATGGCAT CAGCAGTAAA TCCAGATCTG CTGATAGAAG TTGATGGTGG TGTGGGGCTG
CACAATACAG CTGCTTTATT GCAGGCCGGG GCCGATGTAC TGGTTGCAGG AAACGCTATT
TTTGCAGCTG CATCACCTGC CGGTATGATT GCCGAACTTA AACAGATTGA GGGTGGGCTA
GTGCAGAGGG CTTAA
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| Protein sequence | MSHLIAPSVL SADFANLQRD IEMINASAAD WFHVDIMDGV FVPNISFGFP VMEAIKRYAE
KPLDVHLMIV NPDQYIERFA AAGAAMITVH YEACTHLHRT VQAIHATGCR AGVALNPHTP
VSMLKDLLTD LDMVLIMSVN PGFGGQQFIP NSLNKIAELR KMASAVNPDL LIEVDGGVGL
HNTAALLQAG ADVLVAGNAI FAAASPAGMI AELKQIEGGL VQRA
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