| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1839 |
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| Symbol | |
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| ID | 8252942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2128556 |
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| End bp | 2130163 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644935489 |
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| Product | Alpha-galactosidase |
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| Protein accession | YP_003092109 |
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| Protein GI | 255531737 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000186405 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACAAT TTATAACAGG CTGCTTACTT TCCTTTGGCA TTTTATGTCT GACCAATCAC
CTGGTAAAGG CGCAGGGCGC TCCGGATACC TTAAAAAAAT ATATCCTTAC GCCTGCCCCA
CCCCAAACTC CGCGCATCAA CGGGGCCAGA ATATTTGGGC TCCGTCCAGG CTCTGCCTTC
CTTTATACCA TCCCTGCAAC AGGCATTCGC CCGATGCACT TCGGAGCTTT GAATTTGCCA
AAAGGTTTAA CCGTAGACCC CGGTTCTGGC CGGATAACGG GAAAAATAAC AGAACGCGGG
GAATATGAAG TAACCCTGAC CGCAAAAAAT TCATTAGGAG AATCTAAACG GACATTTAAG
ATAGTAGTGG GTGATCAGAT AGCCCTAACA CCTCCAATGG GCTGGAATAG CTGGAATTGC
TGGGGCGATG CCGTAAGCCA GGAAAAGGTA TTGAGTTCGG CCAAAGCAAT GGTAGAAAAA
GGCCTGCTGA ATTATGGCTG GCAATACATC AATATAGACG ATGGCTGGCA GGGACTTCGT
GGTGGAAAAT ACAATGCCAT TCAATGTAAC AGCAAATTTC CTGATATGAA GGGTCTTGCC
GATGAAGTAC ACAGGATGGG ACTTAAAATA GGAATTTACT CTGGTCCCTG GGTAGGAACC
TATGCCGGGC ATCTCGGGGC TTATTCTGAC AATGCCGATG GTACGTACGA CTGGGTGAAA
CAAGGGAAAC ACAATGAATT TTACCGTTTT GCTGATCCTG AGAAAAAGGA AAAGCATGGC
ATAAACTACC ACCACGGCAA ATATTCATTT GTGAAAAATG ACGTACAGCA ATGGATGGAC
TGGGGAATGG ATTACCTGAA ATACGATTGG AACCCCAACG ATGTATACCA TGTAAAAGAA
ATGAAGGACG CATTACGTTC TTATAAACGG GATGTAGTAT ACAGTTTGTC TAACAGTGCC
CCTTACGGAG ATGCCACACA ATGGGAAAAA ATGGCCAATA GCTGGAGGAC TACCGGTGAT
ATCAGAGACA CCTGGGAGCG GATGTGCCAG CTTGGCTTTA ATCAAACCAA ATGGGCCCCT
TTTGCCGGTC CCGGACATTG GATAGACCCG GATATGCTGG TAGTAGGGAT GGTAGGCTGG
GGACCTAAAC TACATTATAC AAAGCTAACT GCTGATGAAC AATACACGCA CATCAGTTTA
TGGTGTTTAC TCGCTTCTCC CCTGTTAATT GGCTGTGATA TGGCCCAGCT GGATGACTTC
ACCATCAGTT TGCTAACCAA CAACGAGGTG ATTGATGTAA ACCAGGATCC AATGGGCAAG
TTTGGTATGC TGGTCGCTGA AAATGGGGAA ACAGTGGTAT ATGCCAAACC GCTGGAGGAT
GGTTCAATGG CTGTTGGTCT GTTTAACCGT GGACAAAAAT CAGAAAAGAT CACTGTCAAC
TGGAAAACCC TGGGATTAAG GGGCGAACAA ACGGTTCGTG ATCTATGGAG ACAGCAGGAC
GTTGCCAAAT CCGATCAGGA ATTTTCATCA GAAGTGAACC CGCATGGTGT CCGTTTTATA
AAAGTATATC CTGGAAACAG CAGAACACAG GCAACTTCCG GAAAATAA
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| Protein sequence | MKQFITGCLL SFGILCLTNH LVKAQGAPDT LKKYILTPAP PQTPRINGAR IFGLRPGSAF
LYTIPATGIR PMHFGALNLP KGLTVDPGSG RITGKITERG EYEVTLTAKN SLGESKRTFK
IVVGDQIALT PPMGWNSWNC WGDAVSQEKV LSSAKAMVEK GLLNYGWQYI NIDDGWQGLR
GGKYNAIQCN SKFPDMKGLA DEVHRMGLKI GIYSGPWVGT YAGHLGAYSD NADGTYDWVK
QGKHNEFYRF ADPEKKEKHG INYHHGKYSF VKNDVQQWMD WGMDYLKYDW NPNDVYHVKE
MKDALRSYKR DVVYSLSNSA PYGDATQWEK MANSWRTTGD IRDTWERMCQ LGFNQTKWAP
FAGPGHWIDP DMLVVGMVGW GPKLHYTKLT ADEQYTHISL WCLLASPLLI GCDMAQLDDF
TISLLTNNEV IDVNQDPMGK FGMLVAENGE TVVYAKPLED GSMAVGLFNR GQKSEKITVN
WKTLGLRGEQ TVRDLWRQQD VAKSDQEFSS EVNPHGVRFI KVYPGNSRTQ ATSGK
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